RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 MBD6Q96DN6 1003 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 SPDL1Q96EA4 605 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 ZC3HAV1LQ96H79 300 aaKnown RBP9.95□□□□□ -0.82
CKS1B-206ENST00000474215 TMEM19Q96HH6 336 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 ARL5BQ96KC2 179 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 PSD2Q9BQI7 771 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 HDHD5Q9BXW7 423 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 CXXC4Q9H2H0 198 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 RABEP2Q9H5N1 569 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 BCO1Q9HAY6 547 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 A4GALTQ9NPC4 353 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 RLIMQ9NVW2 624 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 SLC25A37Q9NYZ2 338 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 ING1Q9UK53 422 aaPredicted RBP9.95□□□□□ -0.82
CKS1B-206ENST00000474215 HDGFL3Q9Y3E1 203 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 MPDZO75970 2070 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 TMED7-TICAM2A0A0A6YYA0 188 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 A0A1W2PPR1 153 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 ZNF724A8MTY0 619 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 NR5A2O00482 541 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 SIAH2O43255 324 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 ZNF208O43345 1280 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 DNPH1O43598 174 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 ATE1O95260 518 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 PMS2P2O95744 297 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 THBDP07204 575 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 FESP07332 822 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 THBS1P07996 1170 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 NUDT7P0C024 238 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 BMP2P12643 396 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 NCF2P19878 526 aaPredicted RBP9.94□□□□□ -0.82
CKS1B-206ENST00000474215 KLK2P20151 261 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 PSMB1P20618 241 aaKnown RBP9.94□□□□□ -0.82
CKS1B-206ENST00000474215 TACR3P29371 465 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 POLR2HP52434 150 aaKnown RBP9.94□□□□□ -0.82
CKS1B-206ENST00000474215 FADDQ13158 208 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 KEAP1Q14145 624 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 SQLEQ14534 574 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 P2RY6Q15077 328 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 LIN52Q52LA3 116 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 RPS26P11Q5JNZ5 115 aaPredicted RBP9.94□□□□□ -0.82
CKS1B-206ENST00000474215 PAGE3Q5JUK9 113 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 PRAMEF8Q5VWM4 474 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 PRAMEF7Q5VXH5 474 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 TFAP2EQ6VUC0 442 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 ZNF836Q6ZNA1 936 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 CXorf67Q86X51 503 aaPredicted RBP9.94□□□□□ -0.82
CKS1B-206ENST00000474215 MSRB3Q8IXL7 192 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 GABRG1Q8N1C3 465 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 CLIP4Q8N3C7 705 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 STEAP2Q8NFT2 490 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 ZNF775Q96BV0 537 aaPredicted RBP9.94□□□□□ -0.82
CKS1B-206ENST00000474215 ZHX1-C8orf76Q96EF9 292 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 PIK3IP1Q96FE7 263 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 THOC1Q96FV9 657 aaKnown RBP9.94□□□□□ -0.82
CKS1B-206ENST00000474215 OR11A1Q9GZK7 315 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 ADAM19Q9H013 955 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 OR10A4Q9H209 315 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 ARMC7Q9H6L4 198 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 CACYBPQ9HB71 228 aaKnown RBP9.94□□□□□ -0.82
CKS1B-206ENST00000474215 BCL2L10Q9HD36 194 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 SLAMF8Q9P0V8 285 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 TMEM181Q9P2C4 612 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 OSGIN1Q9UJX0 560 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 TRAPPC4Q9Y296 219 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 IFT52Q9Y366 437 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 TMED7Q9Y3B3 224 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 GMEB1Q9Y692 573 aa9.94□□□□□ -0.82
CKS1B-206ENST00000474215 AKAP9Q99996 3911 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 A0A1W2PP18 115 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 ZNF814B7Z6K7 855 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 C5orf58C9J3I9 102 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 KLF4O43474 513 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 EDF1O60869 148 aaKnown RBP9.93□□□□□ -0.82
CKS1B-206ENST00000474215 GCM2O75603 506 aaPredicted RBP9.93□□□□□ -0.82
CKS1B-206ENST00000474215 PGM3O95394 542 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 ADAP00813 363 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 GKN3PP0CG01 181 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 PPIBP23284 216 aaKnown RBP9.93□□□□□ -0.82
CKS1B-206ENST00000474215 CXCR1P25024 350 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 ACAA2P42765 397 aaKnown RBP9.93□□□□□ -0.82
CKS1B-206ENST00000474215 OR3A2P47893 321 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 OR2B6P58173 313 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 PDK3Q15120 406 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 ZNF311Q5JNZ3 666 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 SFRP5Q5T4F7 317 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 RNF220Q5VTB9 566 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 GALNT5Q7Z7M9 940 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 MAL2Q969L2 176 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 DDIT4LQ96D03 193 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 MS4A3Q96HJ5 214 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 ALPK1Q96QP1 1244 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 ZNF300Q96RE9 604 aaPredicted RBP9.93□□□□□ -0.82
CKS1B-206ENST00000474215 SPATA9Q9BWV2 254 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 ACTR6Q9GZN1 396 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 NPHS2Q9NP85 383 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 EMC3Q9P0I2 261 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 VAPAQ9P0L0 249 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 DCTN4Q9UJW0 460 aa9.93□□□□□ -0.82
CKS1B-206ENST00000474215 TRIM33Q9UPN9 1127 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms