RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 PRORSD1PA6NEY8 169 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 FAAHO00519 579 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 ADAM11O75078 769 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 SS18L1O75177 396 aaPredicted RBP12.71□□□□□ -0.38
VAMP4-203ENST00000474047 CD8BP10966 210 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 POU2F1P14859 743 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 AQP1P29972 269 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 CLK1P49759 484 aaKnown RBP12.71□□□□□ -0.38
VAMP4-203ENST00000474047 CAPRIN1Q14444 709 aaKnown RBP12.71□□□□□ -0.38
VAMP4-203ENST00000474047 WBP2NLQ6ICG8 309 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 TMPPEQ6ZT21 453 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 ADGRG3Q86Y34 549 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 PCYOX1LQ8NBM8 494 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 C11orf65Q8NCR3 313 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 HIPK4Q8NE63 616 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 LINC01560Q8TB33 94 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 ABHD3Q8WU67 409 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 ZNF317Q96PQ6 595 aaPredicted RBP12.71□□□□□ -0.38
VAMP4-203ENST00000474047 SH3GL1Q99961 368 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 C12orf49Q9H741 205 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 ELOVL5Q9NYP7 299 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 RPS6KB2Q9UBS0 482 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 OSGIN1Q9UJX0 560 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 PRDM4Q9UKN5 801 aa12.71□□□□□ -0.38
VAMP4-203ENST00000474047 BBIP1A8MTZ0 92 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 MRASO14807 208 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 CASKO14936 926 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 CCDC22O60826 627 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 ADSLP30566 484 aaPredicted RBP12.7□□□□□ -0.38
VAMP4-203ENST00000474047 CD79BP40259 229 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 OR2B6P58173 313 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 PLAURQ03405 335 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 TRMT5Q32P41 509 aaKnown RBP12.7□□□□□ -0.38
VAMP4-203ENST00000474047 SNX32Q86XE0 403 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 C10orf111Q8N326 155 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 RNF128Q8TEB7 428 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 DNAJA3Q96EY1 480 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 TACO1Q9BSH4 297 aaKnown RBP12.7□□□□□ -0.38
VAMP4-203ENST00000474047 OR11A1Q9GZK7 315 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 FAM107BQ9H098 131 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 NSRP1Q9H0G5 558 aaKnown RBP12.7□□□□□ -0.38
VAMP4-203ENST00000474047 PLSCR4Q9NRQ2 329 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 GID8Q9NWU2 228 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 KLHL28Q9NXS3 571 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 KLHL9Q9P2J3 617 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 HDGFL3Q9Y3E1 203 aa12.7□□□□□ -0.38
VAMP4-203ENST00000474047 FBP2O00757 339 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 CGAP01215 116 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 FESP07332 822 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 AGTR1P30556 359 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 PRKAR1BP31321 381 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 ACAA2P42765 397 aaKnown RBP12.69□□□□□ -0.38
VAMP4-203ENST00000474047 MAP2K6P52564 334 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 FAM27E3Q08E93 113 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 RBBP4Q09028 425 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 RASGEF1BQ0VAM2 473 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 ZNF474Q6S9Z5 364 aaPredicted RBP12.69□□□□□ -0.38
VAMP4-203ENST00000474047 CPLX4Q7Z7G2 160 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 SERPINA11Q86U17 422 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 ARMC8Q8IUR7 673 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 TUSC5Q8IXB3 177 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 BHLHE22Q8NFJ8 381 aaPredicted RBP12.69□□□□□ -0.38
VAMP4-203ENST00000474047 C10orf82Q8WW14 230 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 LURAP1Q96LR2 239 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 ELAC2Q9BQ52 826 aaKnown RBP12.69□□□□□ -0.38
VAMP4-203ENST00000474047 ECSITQ9BQ95 431 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 KLHL4Q9C0H6 718 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 PIF1Q9H611 641 aa12.69□□□□□ -0.38
VAMP4-203ENST00000474047 TMEM72A0PK05 275 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 ZNF208O43345 1280 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 FRS3O43559 492 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 PMS2P2O95744 297 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 NPPAP01160 153 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 YES1P07947 543 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 EPXP11678 715 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 PRG2P13727 222 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 NCALDP61601 193 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 SELPLGQ14242 412 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 GUSBP1Q15486 140 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 COQ5Q5HYK3 327 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 REP15Q6BDI9 236 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 BEND4Q6ZU67 534 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 SPATA21Q7Z572 469 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 SLC30A8Q8IWU4 369 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 OR10A6Q8NH74 314 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 RNF217Q8TC41 542 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 SLC26A7Q8TE54 656 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 LRRC58Q96CX6 371 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 ARL5BQ96KC2 179 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 ADAM19Q9H013 955 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 GP6Q9HCN6 339 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 ARMCX1Q9P291 453 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 TMEM181Q9P2C4 612 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 KLHL13Q9P2N7 655 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 SH3D21A4FU49 640 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 C16orf97H3BN30 126 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 SLC22A2O15244 555 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 SEC24CP53992 1094 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 SLC35A1P78382 337 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 HOXC5Q00444 222 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms