RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PROCP04070 461 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 IGFBP1P08833 259 aaPredicted RBP8.13□□□□□ -1.11
VCL-204ENST00000472585 LINC00032P0C843 101 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 UROSP10746 265 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 BCKDHAP12694 445 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 PCMT1P22061 227 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 SLC7A1P30825 629 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 CCT3P49368 545 aaKnown RBP8.13□□□□□ -1.11
VCL-204ENST00000472585 SUMO3P55854 103 aaPredicted RBP8.13□□□□□ -1.11
VCL-204ENST00000472585 ETF1P62495 437 aaKnown RBP8.13□□□□□ -1.11
VCL-204ENST00000472585 H3F3AP84243 136 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 MLC1Q15049 377 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 PDK3Q15120 406 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 PDCD2Q16342 344 aaPredicted RBP8.13□□□□□ -1.11
VCL-204ENST00000472585 UGT3A2Q3SY77 523 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 PRR31Q5SQ13 230 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 PDZK1Q5T2W1 519 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 C8orf74Q6P047 294 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 CLEC4FQ8N1N0 589 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 UBE2J2Q8N2K1 259 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 OR5D16Q8NGK9 328 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 PSMA8Q8TAA3 256 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 ZNF418Q8TF45 676 aaPredicted RBP8.13□□□□□ -1.11
VCL-204ENST00000472585 ZG16BQ96DA0 208 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 FBXO17Q96EF6 278 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 METTL2AQ96IZ6 378 aaKnown RBP8.13□□□□□ -1.11
VCL-204ENST00000472585 ACTRT3Q9BYD9 372 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 OR11A1Q9GZK7 315 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 LAT2Q9GZY6 243 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 HOXD1Q9GZZ0 328 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 METTL17Q9H7H0 456 aaPredicted RBP8.13□□□□□ -1.11
VCL-204ENST00000472585 HHATLQ9HCP6 504 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 MYOZ1Q9NP98 299 aaPredicted RBP8.13□□□□□ -1.11
VCL-204ENST00000472585 CTPS2Q9NRF8 586 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 SLC7A10Q9NS82 523 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 ZCCHC3Q9NUD5 404 aaKnown RBP8.13□□□□□ -1.11
VCL-204ENST00000472585 MALT1Q9UDY8 824 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 ATP6V1HQ9UI12 483 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 MOKQ9UQ07 419 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 NOSIPQ9Y314 301 aaKnown RBP8.13□□□□□ -1.11
VCL-204ENST00000472585 DNAJC15Q9Y5T4 150 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
VCL-204ENST00000472585 EXOC1LA0A1B0GW35 172 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 CIB4A0PJX0 185 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 TMEM233B4DJY2 109 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 TRIM77I1YAP6 450 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 SULT2B1O00204 365 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 ZNF264O43296 627 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 EIF4E2O60573 245 aaKnown RBP8.12□□□□□ -1.11
VCL-204ENST00000472585 UGT2B17O75795 530 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 HSPA4LO95757 839 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 C6orf47O95873 294 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 C1QCP02747 245 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 UBL4AP11441 157 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 ASMTP46597 345 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 DNAJB13P59910 316 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 RPS26P62854 115 aaKnown RBP8.12□□□□□ -1.11
VCL-204ENST00000472585 RPL38P63173 70 aaKnown RBP8.12□□□□□ -1.11
VCL-204ENST00000472585 ZNF141Q15928 474 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 ZSWIM7Q19AV6 140 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 MIDNQ504T8 468 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 SYT14P1Q58G82 188 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 OXLD1Q5BKU9 147 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 TSPO2Q5TGU0 170 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 LIPMQ5VYY2 423 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 RINLQ6ZS11 566 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 LCA5Q86VQ0 697 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 ADGRG3Q86Y34 549 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 KRTCAP2Q8N6L1 136 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 ZNF614Q8N883 585 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 ZIC4Q8N9L1 334 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 LINC01356Q8N9X3 169 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 SEMA6DQ8NFY4 1073 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 ZFP28Q8NHY6 868 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 APH1AQ96BI3 265 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 CHMP6Q96FZ7 201 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 OR7D2Q96RA2 312 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 FMO2Q99518 471 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 CCDC106Q9BWC9 280 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 BPESC1Q9GZL8 116 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 ZNF696Q9H7X3 374 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 SLC17A5Q9NRA2 495 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 ACER3Q9NUN7 267 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 OXSMQ9NWU1 459 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 ASB6Q9NWX5 421 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 TAS2R16Q9NYV7 291 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 FIS1Q9Y3D6 152 aa8.12□□□□□ -1.11
VCL-204ENST00000472585 NUP214P35658 2090 aaPredicted RBP8.11□□□□□ -1.11
VCL-204ENST00000472585 PRAMEF27A3QJZ7 478 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 SLC28A1O00337 649 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 KLF11O14901 512 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 SCAMP2O15127 329 aaKnown RBP8.11□□□□□ -1.11
VCL-204ENST00000472585 RIPK2O43353 540 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 PLIN3O60664 434 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 URI1O94763 535 aaPredicted RBP8.11□□□□□ -1.11
VCL-204ENST00000472585 GSTA1P08263 222 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 ABHD2P08910 425 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 FAM153BP0C7A2 387 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 MYL2P10916 166 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 IMPDH2P12268 514 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms