RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 LZICQ8WZA0 190 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 PROX1Q92786 737 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 CPNE4Q96A23 557 aaPredicted RBP13.58□□□□□ -0.24
SNX13-205ENST00000471744 DDIT4LQ96D03 193 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 C12orf10Q9HB07 376 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 OSGIN1Q9UJX0 560 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 RNF6Q9Y252 685 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 TMED7Q9Y3B3 224 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 HDGFL3Q9Y3E1 203 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 FLNBO75369 2602 aaKnown RBP13.57□□□□□ -0.24
SNX13-205ENST00000471744 A0A0G2JNJ9 132 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 H0YC42 278 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 FRS3O43559 492 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 GMNNO75496 209 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 RCBTB2O95199 551 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 CLDN14O95500 239 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 IL18BPO95998 194 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 CRHP06850 196 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 FESP07332 822 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 PRG2P13727 222 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 CD247P20963 164 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 HTR1EP28566 365 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 ZNF136P52737 540 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 TPD52P55327 224 aaPredicted RBP13.57□□□□□ -0.24
SNX13-205ENST00000471744 RAC3P60763 192 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 CSNK2A1P68400 391 aaPredicted RBP13.57□□□□□ -0.24
SNX13-205ENST00000471744 PON3Q15166 354 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 SLC25A35Q3KQZ1 300 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 GLIPR1L2Q4G1C9 344 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 LRRC23Q53EV4 343 aaPredicted RBP13.57□□□□□ -0.24
SNX13-205ENST00000471744 GTF2IRD2BQ6EKJ0 949 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 NCCRP1Q6ZVX7 275 aaPredicted RBP13.57□□□□□ -0.24
SNX13-205ENST00000471744 GTF2IRD2Q86UP8 949 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 ADGRG3Q86Y34 549 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 ARHGAP24Q8N264 748 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 OR52E4Q8NGH9 312 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 OSTF1Q92882 214 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 OR5B2Q96R09 309 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 ARHGDIGQ99819 225 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 PRRG4Q9BZD6 226 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 TMEM27Q9HBJ8 222 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 ADPRHL2Q9NX46 363 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 SELENONQ9NZV5 590 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 ZNF629Q9UEG4 869 aaPredicted RBP13.57□□□□□ -0.24
SNX13-205ENST00000471744 Q9UFV3 132 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 USP22Q9UPT9 525 aa13.57□□□□□ -0.24
SNX13-205ENST00000471744 KLF2Q9Y5W3 355 aaPredicted RBP13.57□□□□□ -0.24
SNX13-205ENST00000471744 B2RBV5 119 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 CXCR6O00574 342 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 DVL2O14641 736 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 DNPH1O43598 174 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 CXCL13O43927 109 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 TOXO94900 526 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 OPN1LWP04000 364 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 RNF224P0DH78 156 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 TMIGD3P0DMS9 266 aaPredicted RBP13.56□□□□□ -0.24
SNX13-205ENST00000471744 TFPIP10646 304 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 PNMTP11086 282 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 HSD17B1P14061 328 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 CTSSP25774 331 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 SHC1P29353 583 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 OPRM1P35372 400 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 CRYBA2P53672 197 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 SLC25A3Q00325 362 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 ULK3Q6PHR2 472 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 C6orf89Q6UWU4 347 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 TMPPEQ6ZT21 453 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 DEFB107AQ8IZN7 70 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 C9orf106Q8NAJ2 232 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 GPR32P1Q8NGA4 272 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 LILRB4Q8NHJ6 448 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 FIG4Q92562 907 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 C3orf49Q96BT1 292 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 ZHX1-C8orf76Q96EF9 292 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 ZNF845Q96IR2 970 aaPredicted RBP13.56□□□□□ -0.24
SNX13-205ENST00000471744 SFXN3Q9BWM7 321 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 RSPO3Q9BXY4 272 aaPredicted RBP13.56□□□□□ -0.24
SNX13-205ENST00000471744 COQ10BQ9H8M1 238 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 GLRX2Q9NS18 164 aa13.56□□□□□ -0.24
SNX13-205ENST00000471744 ASH1LQ9NR48 2969 aaKnown RBP13.55□□□□□ -0.24
SNX13-205ENST00000471744 ELOA3DA6NLF2 546 aaPredicted RBP13.55□□□□□ -0.24
SNX13-205ENST00000471744 KDM4EB2RXH2 506 aaPredicted RBP13.55□□□□□ -0.24
SNX13-205ENST00000471744 PMS2P2O95744 297 aa13.55□□□□□ -0.24
SNX13-205ENST00000471744 TGM6O95932 706 aa13.55□□□□□ -0.24
SNX13-205ENST00000471744 HOXC5Q00444 222 aa13.55□□□□□ -0.24
SNX13-205ENST00000471744 ZNF239Q16600 458 aaKnown RBP13.55□□□□□ -0.24
SNX13-205ENST00000471744 ELOA3BQ3SY89 546 aa13.55□□□□□ -0.24
SNX13-205ENST00000471744 CYBRD1Q53TN4 286 aa13.55□□□□□ -0.24
SNX13-205ENST00000471744 SWT1Q5T5J6 900 aaKnown RBP13.55□□□□□ -0.24
SNX13-205ENST00000471744 ZNF613Q6PF04 617 aa13.55□□□□□ -0.24
SNX13-205ENST00000471744 C5orf46Q6UWT4 87 aa13.55□□□□□ -0.24
SNX13-205ENST00000471744 ATG4DQ86TL0 474 aaPredicted RBP13.55□□□□□ -0.24
SNX13-205ENST00000471744 COMTD1Q86VU5 262 aa13.55□□□□□ -0.24
SNX13-205ENST00000471744 CCDC71Q8IV32 467 aaPredicted RBP13.55□□□□□ -0.24
SNX13-205ENST00000471744 SLC43A2Q8N370 569 aa13.55□□□□□ -0.24
SNX13-205ENST00000471744 ELOA3Q8NG57 546 aa13.55□□□□□ -0.24
SNX13-205ENST00000471744 FNDC9Q8TBE3 224 aa13.55□□□□□ -0.24
SNX13-205ENST00000471744 STK35Q8TDR2 534 aa13.55□□□□□ -0.24
SNX13-205ENST00000471744 SLC47A1Q96FL8 570 aa13.55□□□□□ -0.24
SNX13-205ENST00000471744 PSMG3-AS1Q96PY0 264 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms