RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 TMPPEQ6ZT21 453 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 GTF2IRD2Q86UP8 949 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 CADM2Q8N3J6 435 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 RELL2Q8NC24 303 aaPredicted RBP13.7□□□□□ -0.22
SDC3-203ENST00000471567 OR2T12Q8NG77 320 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 RASSF5Q8WWW0 418 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 OR5B2Q96R09 309 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 GLRX2Q9NS18 164 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 TMED7Q9Y3B3 224 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 HDGFL3Q9Y3E1 203 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 A0A1W2PNV4 684 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 NKX2-6A6NCS4 301 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 CCT8L1PA6NM43 557 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 AQP8O94778 261 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 LGI1O95970 557 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 IFNA14P01570 189 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 TFPIP10646 304 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 CXCR1P25024 350 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 GRNP28799 593 aaKnown RBP13.69□□□□□ -0.22
SDC3-203ENST00000471567 KCNJ5P48544 419 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 CSNK2A1P68400 391 aaPredicted RBP13.69□□□□□ -0.22
SDC3-203ENST00000471567 ZNF239Q16600 458 aaKnown RBP13.69□□□□□ -0.22
SDC3-203ENST00000471567 FBXL19-AS1Q494R0 122 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 GLIPR1L2Q4G1C9 344 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 MICU2Q8IYU8 434 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 GCNT2Q8N0V5 402 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 LSMEM1Q8N8F7 131 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 SMYD1Q8NB12 490 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 CCDC197Q8NCU1 140 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 SLC26A7Q8TE54 656 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 DDIT4LQ96D03 193 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 LRRC46Q96FV0 321 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 SRXN1Q9BYN0 137 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 TRIM2Q9C040 744 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 PIGMQ9H3S5 423 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 TESQ9UGI8 421 aaKnown RBP13.69□□□□□ -0.22
SDC3-203ENST00000471567 TAGLN3Q9UI15 199 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 TRAPPC4Q9Y296 219 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 MED12LQ86YW9 2145 aa13.69□□□□□ -0.22
SDC3-203ENST00000471567 A0A1W2PNR3 127 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 TMEM72A0PK05 275 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 ELOVL7A1L3X0 281 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 FRS3O43559 492 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 DNPH1O43598 174 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 TNFSF13O75888 250 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 PMS2P2O95744 297 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 COL8A1P27658 744 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 DIO1P49895 249 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 ASCL1P50553 236 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 SLC7A2P52569 658 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 RGS8P57771 180 aaPredicted RBP13.68□□□□□ -0.22
SDC3-203ENST00000471567 PSME3P61289 254 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 HOXC5Q00444 222 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 LIPEQ05469 1076 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 KRT72Q14CN4 511 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 GUSBP1Q15486 140 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 DUSP7Q16829 419 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 PPP4R4Q6NUP7 873 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 COMTD1Q86VU5 262 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 SLC43A2Q8N370 569 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 ACBD4Q8NC06 268 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 C3orf49Q96BT1 292 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 TAMM41Q96BW9 452 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 GMPPAQ96IJ6 420 aaPredicted RBP13.68□□□□□ -0.22
SDC3-203ENST00000471567 ZNF559Q9BR84 538 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 POTEKPQ9BYX7 375 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 C12orf10Q9HB07 376 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 GP6Q9HCN6 339 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 JKAMPQ9P055 326 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 RPS6KB2Q9UBS0 482 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 FOXD3Q9UJU5 478 aaPredicted RBP13.68□□□□□ -0.22
SDC3-203ENST00000471567 PACSIN3Q9UKS6 424 aa13.68□□□□□ -0.22
SDC3-203ENST00000471567 INTS1Q8N201 2190 aaKnown RBP13.68□□□□□ -0.22
SDC3-203ENST00000471567 C19orf84I3L1E1 186 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 SULT2B1O00204 365 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 NME4O00746 187 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 FMO6PO60774 539 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 SS18L1O75177 396 aaPredicted RBP13.67□□□□□ -0.22
SDC3-203ENST00000471567 OPN1SWP03999 348 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 CCNA2P20248 432 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 CD247P20963 164 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 KDELR2P33947 212 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 KIR2DL2P43627 348 aaPredicted RBP13.67□□□□□ -0.22
SDC3-203ENST00000471567 MNAT1P51948 309 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 AGFG1P52594 562 aaKnown RBP13.67□□□□□ -0.22
SDC3-203ENST00000471567 CRYBA2P53672 197 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 MYBPHQ13203 477 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 RNPS1Q15287 305 aaKnown RBP13.67□□□□□ -0.22
SDC3-203ENST00000471567 NRF1Q16656 503 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 C6orf89Q6UWU4 347 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 FCRLAQ7L513 359 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 FAM214BQ7L5A3 538 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 ATG4DQ86TL0 474 aaPredicted RBP13.67□□□□□ -0.22
SDC3-203ENST00000471567 RANBP3LQ86VV4 465 aaPredicted RBP13.67□□□□□ -0.22
SDC3-203ENST00000471567 MCEMP1Q8IX19 187 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 GPR32P1Q8NGA4 272 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 OR52E4Q8NGH9 312 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 RNF128Q8TEB7 428 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 DNAJA4Q8WW22 397 aaPredicted RBP13.67□□□□□ -0.22
SDC3-203ENST00000471567 ROBO4Q8WZ75 1007 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms