RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 TAS2R16Q9NYV7 291 aa8.04□□□□□ -1.12
CPSF4-211ENST00000471455 DCTN4Q9UJW0 460 aa8.04□□□□□ -1.12
CPSF4-211ENST00000471455 NOSIPQ9Y314 301 aaKnown RBP8.04□□□□□ -1.12
CPSF4-211ENST00000471455 CCL27Q9Y4X3 112 aa8.04□□□□□ -1.12
CPSF4-211ENST00000471455 ALPK2Q86TB3 2170 aa8.04□□□□□ -1.12
CPSF4-211ENST00000471455 IGKV3D-15A0A087WSY6 115 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 A0A096LNT2 108 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 LOC100289279A0A1B0GTE1 492 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 DUXAA6NLW8 204 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 E7EQL1 145 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 G3V2L1 256 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 SULT2B1O00204 365 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 NDUFS8O00217 210 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 ANKRD28O15084 1053 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 SCAMP2O15127 329 aaKnown RBP8.03□□□□□ -1.12
CPSF4-211ENST00000471455 RIPK2O43353 540 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 EFNA2O43921 213 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 GPRIN2O60269 458 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 LMX1BO60663 402 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 LYPLA1O75608 230 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-211ENST00000471455 URI1O94763 535 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-211ENST00000471455 PGCP20142 388 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 CD40P25942 277 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 ECHS1P30084 290 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 CCT3P49368 545 aaKnown RBP8.03□□□□□ -1.12
CPSF4-211ENST00000471455 DIO1P49895 249 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 ZNF83P51522 516 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 TGFBR3Q03167 851 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 CHRNEQ04844 493 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 TIGD2Q4W5G0 525 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 SYT14P1Q58G82 188 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 XP32Q5T750 250 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 LIPNQ5VXI9 398 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 LIPMQ5VYY2 423 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 CLEC6AQ6EIG7 209 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 ABLIM2Q6H8Q1 611 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 FAM166AQ6J272 317 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 KLHL24Q6TFL4 600 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 TMPPEQ6ZT21 453 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 DDIASQ8IXT1 998 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 C17orf78Q8N4C9 275 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 ZNF525Q8N782 197 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 ZNF433Q8N7K0 673 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-211ENST00000471455 CLHC1Q8NHS4 586 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 C10orf105Q8TEF2 133 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 OIT3Q8WWZ8 545 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 OR5P2Q8WZ92 322 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 PPP3R2Q96LZ3 170 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 ZNF300Q96RE9 604 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-211ENST00000471455 PIMREGQ9BSJ6 248 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 C19orf24Q9BVV8 132 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 NMUR2Q9GZQ4 415 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 MANSC1Q9H8J5 431 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 MYOZ1Q9NP98 299 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-211ENST00000471455 NPAP1Q9NZP6 1156 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 ATP6V1HQ9UI12 483 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 ING1Q9UK53 422 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-211ENST00000471455 AMDHD2Q9Y303 409 aa8.03□□□□□ -1.12
CPSF4-211ENST00000471455 SERINC4A6NH21 518 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 NPIPB9F8W1W9 429 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 M0R1B8 84 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 LSM1O15116 133 aaKnown RBP8.02□□□□□ -1.13
CPSF4-211ENST00000471455 MRPL33O75394 65 aaKnown RBP8.02□□□□□ -1.13
CPSF4-211ENST00000471455 H6PDO95479 791 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 IGHV4-31P0DP07 118 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 TFPIP10646 304 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 BCKDHAP12694 445 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 CPA3P15088 417 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 PAX7P23759 505 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 GCAP28676 217 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 APOBEC1P41238 236 aaKnown RBP8.02□□□□□ -1.13
CPSF4-211ENST00000471455 PDLIM4P50479 330 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 SNRPD2P62316 118 aaKnown RBP8.02□□□□□ -1.13
CPSF4-211ENST00000471455 MERTKQ12866 999 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 SQLEQ14534 574 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 TOMM34Q15785 309 aaPredicted RBP8.02□□□□□ -1.13
CPSF4-211ENST00000471455 KRTAP24-1Q3LI83 254 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 GALNTL6Q49A17 601 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.02□□□□□ -1.13
CPSF4-211ENST00000471455 KANK2Q63ZY3 851 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 EIF3MQ7L2H7 374 aaKnown RBP8.02□□□□□ -1.13
CPSF4-211ENST00000471455 MTDHQ86UE4 582 aaKnown RBP8.02□□□□□ -1.13
CPSF4-211ENST00000471455 IFT20Q8IY31 132 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 C1orf162Q8NEQ5 155 aaPredicted RBP8.02□□□□□ -1.13
CPSF4-211ENST00000471455 OR52N5Q8NH56 324 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 PSMA8Q8TAA3 256 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 KLHDC3Q9BQ90 382 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 LAT2Q9GZY6 243 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 PPCSQ9HAB8 311 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 EML4Q9HC35 981 aaKnown RBP8.02□□□□□ -1.13
CPSF4-211ENST00000471455 SIRT3Q9NTG7 399 aaPredicted RBP8.02□□□□□ -1.13
CPSF4-211ENST00000471455 PARPBPQ9NWS1 579 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 OXSMQ9NWU1 459 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 MALT1Q9UDY8 824 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 TBK1Q9UHD2 729 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 BAIAP2L1Q9UHR4 511 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 FBXO9Q9UK97 447 aaPredicted RBP8.02□□□□□ -1.13
CPSF4-211ENST00000471455 EMCNQ9ULC0 261 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 FIS1Q9Y3D6 152 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 HDGFL3Q9Y3E1 203 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms