RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 TDGQ13569 410 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 KIAA0141Q14154 515 aaPredicted RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 GAMTQ14353 236 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 GRB14Q14449 540 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ANKRD39Q53RE8 183 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 EOGTQ5NDL2 527 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 OR10K2Q6IF99 312 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ZNF770Q6IQ21 691 aaPredicted RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 LIN54Q6MZP7 749 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 PODNL1Q6PEZ8 512 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 SMARCD3Q6STE5 483 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ZNF322Q6U7Q0 402 aaPredicted RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 METTL7BQ6UX53 244 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 TTLL10Q6ZVT0 673 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 MUC20Q8N307 709 aaPredicted RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 CPXM2Q8N436 756 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 HORMAD2Q8N7B1 307 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 C15orf54Q8N8G6 183 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 INO80EQ8NBZ0 244 aaPredicted RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 OR8J2Q8NGG1 315 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 OR13C5Q8NGS8 318 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 SCAMP5Q8TAC9 235 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 RAB8BQ92930 207 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 LCORQ96JN0 433 aaPredicted RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 MOGAT1Q96PD6 335 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 TGM7Q96PF1 710 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 SEC11CQ9BY50 192 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 PLA2G12AQ9BZM1 189 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 OR51I1Q9H343 314 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 SLC32A1Q9H598 525 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 IGFLR1Q9H665 355 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 EXO5Q9H790 373 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 GAR1Q9NY12 217 aaKnown RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 VPS29Q9UBQ0 182 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ZNF230Q9UIE0 474 aaPredicted RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 SLC22A14Q9Y267 594 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 OARD1Q9Y530 152 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 HS3ST4Q9Y661 456 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 DSPPQ9NZW4 1301 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ALPK3Q96L96 1907 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 CACNA1CQ13936 2221 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 NAP1L6A6NFF2 107 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 GGT3PA6NGU5 568 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 RFPL4AA6NLU0 287 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ZBTB42B2RXF5 422 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 RFPL4AL1F8VTS6 287 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 J3QLW9 94 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 FLRT2O43155 660 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 IRAK2O43187 625 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 HBP1O60381 514 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 IFNA2P01563 188 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ATP1B1P05026 303 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 RB1P06400 928 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ZNF19P17023 458 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ZNF7P17097 686 aaPredicted RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 MAPK3P27361 379 aaPredicted RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 OR1E1P30953 314 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 MPIP34949 423 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 AQP2P41181 271 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 PTGER3P43115 390 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 GLP1RP43220 463 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 MAGEB1P43366 347 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 RPS10P46783 165 aaKnown RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 LIMS1P48059 325 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 PTH2RP49190 550 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 CLDN12P56749 244 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 LILRA4P59901 499 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 TWF1Q12792 350 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 TUSC3Q13454 348 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 TEAD2Q15562 447 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ACSM3Q53FZ2 586 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ACTBL2Q562R1 376 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 PRRT3Q5FWE3 981 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 TMEM69Q5SWH9 247 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 FAM182BQ5T319 152 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ARMC12Q5T9G4 340 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 TCTN3Q6NUS6 607 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 FAM151BQ6UXP7 276 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 BAIAP2L2Q6UXY1 529 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 LRRC69Q6ZNQ3 347 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 LRRTM4Q86VH4 590 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 NKAIN4Q8IVV8 208 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ETFBKMTQ8IXQ9 262 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 OR4E2Q8NGC2 313 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 OR9A2Q8NGT5 310 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 OR5W2Q8NH69 310 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 BRIX1Q8TDN6 353 aaKnown RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 ST7LQ8TDW4 575 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 WFIKKN2Q8TEU8 576 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 TMED6Q8WW62 240 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 PPCDCQ96CD2 204 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ALG8Q9BVK2 526 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 BOCQ9BWV1 1114 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ZNF350Q9GZX5 532 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.92□□□□□ -1.78
VPS50-210ENST00000471188 ZNF408Q9H9D4 720 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 NEUROD4Q9HD90 331 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 NMRK2Q9NPI5 230 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 TRIM36Q9NQ86 728 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 OR2S2Q9NQN1 319 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms