RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 MARCH3Q86UD3 253 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 ANKRD46Q86W74 232 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 MISPQ8IVT2 679 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 IQCF2Q8IXL9 164 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 ZNF619Q8N2I2 560 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 TRIML2Q8N7C3 387 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 ZDHHC22Q8N966 263 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 WDSUB1Q8N9V3 476 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 SLC16A11Q8NCK7 471 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 RFWD2Q8NHY2 731 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 PHOSPHO1Q8TCT1 267 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 LRRC8CQ8TDW0 803 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 STACQ99469 402 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 BTBD2Q9BX70 525 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 PRRG4Q9BZD6 226 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 GRIP2Q9C0E4 1043 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 ALG2Q9H553 416 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 C12orf49Q9H741 205 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 AKTIPQ9H8T0 292 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 TMBIM4Q9HC24 238 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 UBQLN4Q9NRR5 601 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 DUSP22Q9NRW4 184 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 EXD2Q9NVH0 621 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 THAP1Q9NVV9 213 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 GIN1Q9NXP7 522 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 CISD1Q9NZ45 108 aaKnown RBP5.17□□□□□ -1.58
VARS-222ENST00000470953 FLRT3Q9NZU0 649 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 MED11Q9P086 117 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 BLOC1S6Q9UL45 172 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 VDAC3Q9Y277 283 aa5.17□□□□□ -1.58
VARS-222ENST00000470953 ARFGEF3Q5TH69 2177 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 NUP214P35658 2090 aaPredicted RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 TMEM247A6NEH6 219 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 SLC22A20A6NK97 555 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 DUXAA6NLW8 204 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 CCT8L1PA6NM43 557 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 GJE1A6NN92 205 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 SHISA9B4DS77 424 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 RNASET2O00584 256 aaKnown RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 POLR3GO15318 223 aaPredicted RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 KCNK2O95069 426 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 NKX2-2O95096 273 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 SYNGR4O95473 234 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 ANP32DO95626 131 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 OXSR1O95747 527 aaPredicted RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 AGR2O95994 175 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 AK1P00568 194 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 CD3EP07766 207 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 DHRS4L1P0CG22 281 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 IDO1P14902 403 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 PPP3CBP16298 524 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 ZNF708P17019 499 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 ZNF17P17021 662 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 CHMP24386 653 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 LCN1P31025 176 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 PTGDSP41222 190 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 FRKP42685 505 aaPredicted RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 RNF144AP50876 292 aaPredicted RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 RPS6KA3P51812 740 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 GFRA1P56159 465 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 SESN3P58005 492 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 UBA52P62987 128 aaKnown RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 EEF1A1P68104 462 aaKnown RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 HBA1P69905 142 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 MLC1Q15049 377 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 RAB35Q15286 201 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.16□□□□□ -1.58
VARS-222ENST00000470953 SPANXN4Q5MJ08 99 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 C6orf10Q5SRN2 563 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 BEND6Q5SZJ8 279 aaPredicted RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 PDSS1Q5T2R2 415 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 CASC10Q5T4H9 136 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 AGBL2Q5U5Z8 902 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 EEF1A1P5Q5VTE0 462 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 TNFAIP8L2Q6P589 184 aaPredicted RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 RHOUQ7L0Q8 258 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 HDXQ7Z353 690 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 SPATA19Q7Z5L4 167 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 CLECL1Q8IZS7 167 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 OR2M3Q8NG83 312 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 OR5D16Q8NGK9 328 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 OR5M1Q8NGP8 315 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 B4GALNT2Q8NHY0 566 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 DUSP19Q8WTR2 217 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 ARL8AQ96BM9 186 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 S100PBPQ96BU1 408 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 C1GALT1C1Q96EU7 318 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 C16orf58Q96GQ5 468 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 REXO5Q96IC2 774 aaKnown RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 ADAD1Q96M93 576 aaKnown RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 FOXN4Q96NZ1 517 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 OR7D2Q96RA2 312 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 PANX1Q96RD7 426 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 SORT1Q99523 831 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 SLC35A5Q9BS91 424 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 C1QTNF5Q9BXJ0 243 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 PINK1Q9BXM7 581 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 HOXD1Q9GZZ0 328 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 FAM107BQ9H098 131 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 TMEM185BQ9H7F4 350 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms