RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 PLEKHA8Q96JA3 519 aa4.61□□□□□ -1.67
RBM39-227ENST00000470563 DNAJC1Q96KC8 554 aaKnown RBP4.61□□□□□ -1.67
RBM39-227ENST00000470563 TAAR6Q96RI8 345 aa4.61□□□□□ -1.67
RBM39-227ENST00000470563 RAB40CQ96S21 281 aa4.61□□□□□ -1.67
RBM39-227ENST00000470563 VAT1Q99536 393 aa4.61□□□□□ -1.67
RBM39-227ENST00000470563 EPYCQ99645 322 aa4.61□□□□□ -1.67
RBM39-227ENST00000470563 GPR22Q99680 433 aa4.61□□□□□ -1.67
RBM39-227ENST00000470563 COQ7Q99807 217 aa4.61□□□□□ -1.67
RBM39-227ENST00000470563 HOPXQ9BPY8 73 aaPredicted RBP4.61□□□□□ -1.67
RBM39-227ENST00000470563 NFKBIZQ9BYH8 718 aa4.61□□□□□ -1.67
RBM39-227ENST00000470563 MED20Q9H944 212 aa4.61□□□□□ -1.67
RBM39-227ENST00000470563 GPN2Q9H9Y4 310 aaPredicted RBP4.61□□□□□ -1.67
RBM39-227ENST00000470563 NMRAL1Q9HBL8 299 aa4.61□□□□□ -1.67
RBM39-227ENST00000470563 EML4Q9HC35 981 aaKnown RBP4.61□□□□□ -1.67
RBM39-227ENST00000470563 TECRQ9NZ01 308 aaKnown RBP4.61□□□□□ -1.67
RBM39-227ENST00000470563 ICAM5Q9UMF0 924 aa4.61□□□□□ -1.67
RBM39-227ENST00000470563 PTPRJQ12913 1337 aa4.61□□□□□ -1.67
RBM39-227ENST00000470563 IGKV6D-21A0A0A0MT36 114 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 LRRIQ4A6NIV6 560 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 K7EQD1 137 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 M0QYV0 167 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 PSMD12O00232 456 aaPredicted RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 FBP2O00757 339 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 SLC22A1O15245 554 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 TNFSF12O43508 249 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 TLX2O43763 284 aaPredicted RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 MRPS14O60783 128 aaKnown RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 LYPLA1O75608 230 aaPredicted RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 SUPT7LO94864 414 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 HMBSP08397 361 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 HIST1H2AGP0C0S8 130 aaPredicted RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 HSD17B1P14061 328 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 GP9P14770 177 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 HOXB8P17481 243 aaPredicted RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 XRCC1P18887 633 aaPredicted RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 CYP2F1P24903 491 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 CHRNB4P30926 498 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 ACAA2P42765 397 aaKnown RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 ACADSBP45954 432 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 ACOT2P49753 483 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 TMED10P49755 219 aaKnown RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 CSRP3P50461 194 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 HLCSP50747 726 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 XGP55808 180 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 BACE1P56817 501 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 SNAP25P60880 206 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 PSME3P61289 254 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 RPS6P62753 249 aaKnown RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 HERV-K104P63124 156 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 TCP10Q12799 353 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 ZNF846Q147U1 533 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 CYTH1Q15438 398 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 ZNF876PQ49A33 203 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 C2CD6Q53TS8 623 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 RBM48Q5RL73 367 aaKnown RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 C6orf52Q5T4I8 152 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 ADAMTSL4-AS1Q5T5F5 129 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 IL23RQ5VWK5 629 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 LYPLAL1Q5VWZ2 237 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 OR6B2Q6IFH4 312 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 LCN8Q6JVE9 175 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 C16orf87Q6PH81 154 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 TTC33Q6PID6 262 aaPredicted RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 ZNF773Q6PK81 442 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 EFL1Q7Z2Z2 1120 aaKnown RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 NOTCH2NLQ7Z3S9 236 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 TMEM135Q86UB9 458 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 HOGA1Q86XE5 327 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 CATSPERDQ86XM0 798 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 OR4N5Q8IXE1 308 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 RAB42Q8N4Z0 105 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 PQLC3Q8N755 202 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 ZNF781Q8N8C0 355 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 OR5B17Q8NGF7 314 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 OR10G7Q8NGN6 311 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 OR2T34Q8NGX1 318 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 OR2T3Q8NH03 318 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 HTR3CQ8WXA8 447 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 HIST1H2ACQ93077 130 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 SLC35B4Q969S0 331 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 C12orf43Q96C57 262 aaKnown RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 CENPNQ96H22 339 aaPredicted RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 LRR1Q96L50 414 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 ZNF641Q96N77 438 aaPredicted RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 DUX3Q96PT4 197 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 TSPAN18Q96SJ8 248 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 CPXM1Q96SM3 734 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 SNRNP25Q9BV90 132 aaKnown RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 MROQ9BYG7 248 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 SLC26A1Q9H2B4 701 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 MTIF3Q9H2K0 278 aaKnown RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 RHOJQ9H4E5 214 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 ASB7Q9H672 318 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 RPF2Q9H7B2 306 aaKnown RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 PARVBQ9HBI1 364 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 HMG20AQ9NP66 347 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 ZNF302Q9NR11 478 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 NRBP2Q9NSY0 501 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 CNOT2Q9NZN8 540 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms