RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 KLHL1Q9NR64 748 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 SDHAF3Q9NRP4 125 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 TEX10Q9NXF1 929 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-208ENST00000469585 CNIH4Q9P003 139 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 FAF1Q9UNN5 650 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-208ENST00000469585 DNAJC15Q9Y5T4 150 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 SNX8Q9Y5X2 465 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 FRYQ5TBA9 3013 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 FREM2Q5SZK8 3169 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 ATP6AP2A0A1C7CYW4 349 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 C4orf51C9J302 202 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 UBFD1O14562 309 aaKnown RBP5.68□□□□□ -1.5
PTCD3-208ENST00000469585 LSM1O15116 133 aaKnown RBP5.68□□□□□ -1.5
PTCD3-208ENST00000469585 PGRMC2O15173 223 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 ATP8B1O43520 1251 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 DIAPH2O60879 1101 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 ATP6AP2O75787 350 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 LRATO95237 230 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 TGDSO95455 350 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 ANP32DO95626 131 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 F10P00742 488 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 SP1P08047 785 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 PRF1P14222 555 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 IDO1P14902 403 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 ATP6V1C1P21283 382 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 ABCD3P28288 659 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 SOAT1P35610 550 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 HTR6P50406 440 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 NR0B1P51843 470 aaKnown RBP5.68□□□□□ -1.5
PTCD3-208ENST00000469585 FOXA1P55317 472 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 IGLV3-21P80748 117 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-208ENST00000469585 HPCAP84074 193 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 BST1Q10588 318 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 HSPB3Q12988 150 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 TOMM20Q15388 145 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 INPP5JQ15735 1006 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-208ENST00000469585 DECR1Q16698 335 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 NADK2Q4G0N4 442 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 KRTCAP3Q53RY4 240 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 ATAD3BQ5T9A4 648 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 FHL5Q5TD97 284 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 IL23RQ5VWK5 629 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 HMBOX1Q6NT76 420 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 H3F3CQ6NXT2 135 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 SLC22A25Q6T423 547 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 IGFL2Q6UWQ7 119 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 ANGPTL8Q6UXH0 198 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 FAM185AQ8N0U4 392 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 GHDCQ8N2G8 530 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 C17orf47Q8NEP4 570 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 OR4N2Q8NGD1 307 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 MPLKIPQ8TAP9 179 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 PTPMT1Q8WUK0 201 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-208ENST00000469585 ANKRD9Q96BM1 317 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-208ENST00000469585 TM4SF18Q96CE8 201 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 TLCD1Q96CP7 247 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 ZNF597Q96LX8 424 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 RILPQ96NA2 401 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 FAM173AQ9BQD7 235 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 C1orf50Q9BV19 199 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 NUF2Q9BZD4 464 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 WWTR1Q9GZV5 400 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 NSRP1Q9H0G5 558 aaKnown RBP5.68□□□□□ -1.5
PTCD3-208ENST00000469585 RABEP2Q9H5N1 569 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 CLMPQ9H6B4 373 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 CXorf21Q9HAI6 301 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 ANKRD10Q9NXR5 420 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 KLRF1Q9NZS2 232 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 PPIEQ9UNP9 301 aaKnown RBP5.68□□□□□ -1.5
PTCD3-208ENST00000469585 SPEGQ15772 3267 aa5.68□□□□□ -1.5
PTCD3-208ENST00000469585 DMXL2Q8TDJ6 3036 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 A0A1W2PRB8 838 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 ANKUB1A6NFN9 424 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 FRG2CA6NGY1 282 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 DUXAA6NLW8 204 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 H3BNH8 94 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 KLF11O14901 512 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 SCAMP2O15127 329 aaKnown RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 UBDO15205 165 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 CDC40O60508 579 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 PRKRAO75569 313 aaKnown RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 REM1O75628 298 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 SNX4O95219 450 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 FGF2P09038 288 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 BCKDHAP12694 445 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 H2AFXP16104 143 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 ABOP16442 354 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 TNFSF8P32971 234 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 S100A3P33764 101 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 CHI3L1P36222 383 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 SOX3P41225 446 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 HNRNPFP52597 415 aaKnown RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 MLLT10P55197 1068 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 KCNK10P57789 538 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 EMX2Q04743 252 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 Q0VFX4 171 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 ETFDHQ16134 617 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 GSTA3Q16772 222 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 PIGGQ5H8A4 983 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 SPINK14Q6IE38 97 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms