RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 ABCA12Q86UK0 2595 aa23.25■■□□□ 1.31
PDCD4-205ENST00000467574 TMED7-TICAM2A0A0A6YYA0 188 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 PRORSD1PA6NEY8 169 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 CCT8L1PA6NM43 557 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 SERPINB7O75635 380 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 OPN1SWP03999 348 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 KIR2DL2P43627 348 aaPredicted RBP23.24■■□□□ 1.31
PDCD4-205ENST00000467574 ASCL1P50553 236 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 WBP2NLQ6ICG8 309 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 CCDC80Q76M96 950 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 GPR32P1Q8NGA4 272 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 RNF128Q8TEB7 428 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 CPNE4Q96A23 557 aaPredicted RBP23.24■■□□□ 1.31
PDCD4-205ENST00000467574 TAMM41Q96BW9 452 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 CMTM5Q96DZ9 223 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 OR5B2Q96R09 309 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 WFDC6Q9BQY6 131 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 OR11A1Q9GZK7 315 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 ENKD1Q9H0I2 346 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 TMED7Q9Y3B3 224 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 CACNA1DQ01668 2161 aa23.24■■□□□ 1.31
PDCD4-205ENST00000467574 FREM1Q5H8C1 2179 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 TMEM72A0PK05 275 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 FAM220BPB1ANY3 271 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 M0QX08 132 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 SYNGR4O95473 234 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 HTR2AP28223 471 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 RAC3P60763 192 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 PPP4R4Q6NUP7 873 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 VWA1Q6PCB0 445 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 ARPINQ7Z6K5 226 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 PATL1Q86TB9 770 aaKnown RBP23.23■■□□□ 1.31
PDCD4-205ENST00000467574 SLC15A3Q8IY34 581 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 CADM2Q8N3J6 435 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 ANKS4BQ8N8V4 417 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 SMYD1Q8NB12 490 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 BHLHE22Q8NFJ8 381 aaPredicted RBP23.23■■□□□ 1.31
PDCD4-205ENST00000467574 ROBO4Q8WZ75 1007 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 C3orf49Q96BT1 292 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 ARL5BQ96KC2 179 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 EFCAB1Q9HAE3 211 aa23.23■■□□□ 1.31
PDCD4-205ENST00000467574 GMPR2Q9P2T1 348 aaKnown RBP23.23■■□□□ 1.31
PDCD4-205ENST00000467574 SPIN1Q9Y657 262 aaPredicted RBP23.23■■□□□ 1.31
PDCD4-205ENST00000467574 APCP25054 2843 aa23.22■■□□□ 1.31
PDCD4-205ENST00000467574 CYSRT1A8MQ03 144 aa23.22■■□□□ 1.31
PDCD4-205ENST00000467574 FAM107AO95990 144 aa23.22■■□□□ 1.31
PDCD4-205ENST00000467574 KLK2P20151 261 aa23.22■■□□□ 1.31
PDCD4-205ENST00000467574 CD247P20963 164 aa23.22■■□□□ 1.31
PDCD4-205ENST00000467574 NUDT2P50583 147 aa23.22■■□□□ 1.31
PDCD4-205ENST00000467574 DUSP7Q16829 419 aa23.22■■□□□ 1.31
PDCD4-205ENST00000467574 INTS11Q5TA45 600 aaKnown RBP23.22■■□□□ 1.31
PDCD4-205ENST00000467574 FAM91A1Q658Y4 838 aa23.22■■□□□ 1.31
PDCD4-205ENST00000467574 TMPPEQ6ZT21 453 aa23.22■■□□□ 1.31
PDCD4-205ENST00000467574 STARD4Q96DR4 205 aa23.22■■□□□ 1.31
PDCD4-205ENST00000467574 TIGARQ9NQ88 270 aa23.22■■□□□ 1.31
PDCD4-205ENST00000467574 ADAM21Q9UKJ8 722 aa23.22■■□□□ 1.31
PDCD4-205ENST00000467574 ZC3H12DA2A288 527 aaKnown RBP23.21■■□□□ 1.31
PDCD4-205ENST00000467574 EEF1E1-BLOC1S5C9J1V9 151 aa23.21■■□□□ 1.31
PDCD4-205ENST00000467574 NME4O00746 187 aa23.21■■□□□ 1.31
PDCD4-205ENST00000467574 EEF1E1O43324 174 aaKnown RBP23.21■■□□□ 1.31
PDCD4-205ENST00000467574 ZNF208O43345 1280 aa23.21■■□□□ 1.31
PDCD4-205ENST00000467574 SS18L1O75177 396 aaPredicted RBP23.21■■□□□ 1.31
PDCD4-205ENST00000467574 CCNA2P20248 432 aa23.21■■□□□ 1.31
PDCD4-205ENST00000467574 DIO1P49895 249 aa23.21■■□□□ 1.31
PDCD4-205ENST00000467574 COPZ1P61923 177 aa23.21■■□□□ 1.31
PDCD4-205ENST00000467574 MYBPHQ13203 477 aa23.21■■□□□ 1.31
PDCD4-205ENST00000467574 VEZF1Q14119 521 aa23.21■■□□□ 1.31
PDCD4-205ENST00000467574 ERICH5Q6P6B1 374 aa23.21■■□□□ 1.31
PDCD4-205ENST00000467574 ABHD3Q8WU67 409 aa23.21■■□□□ 1.31
PDCD4-205ENST00000467574 ARHGDIGQ99819 225 aa23.21■■□□□ 1.31
PDCD4-205ENST00000467574 PRRG4Q9BZD6 226 aa23.21■■□□□ 1.31
PDCD4-205ENST00000467574 PACSIN3Q9UKS6 424 aa23.21■■□□□ 1.31
PDCD4-205ENST00000467574 TACC2O95359 2948 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 SYT5O00445 386 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 TPST2O60704 377 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 LGI1O95970 557 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 ENPP1P22413 925 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 FKBP2P26885 142 aaKnown RBP23.2■■□□□ 1.3
PDCD4-205ENST00000467574 KCNJ5P48544 419 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 CLK1P49759 484 aaKnown RBP23.2■■□□□ 1.3
PDCD4-205ENST00000467574 SLC7A2P52569 658 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 SIRPAP78324 504 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 NRF1Q16656 503 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 EEF1A1P5Q5VTE0 462 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 BTLAQ7Z6A9 289 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 ATG4DQ86TL0 474 aaPredicted RBP23.2■■□□□ 1.3
PDCD4-205ENST00000467574 LSMEM1Q8N8F7 131 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 CNEP1R1Q8N9A8 125 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 OR2T12Q8NG77 320 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 GMPPAQ96IJ6 420 aaPredicted RBP23.2■■□□□ 1.3
PDCD4-205ENST00000467574 LRRC37BQ96QE4 947 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 HOPXQ9BPY8 73 aaPredicted RBP23.2■■□□□ 1.3
PDCD4-205ENST00000467574 SPOCK3Q9BQ16 436 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 PIGMQ9H3S5 423 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 CLEC4AQ9UMR7 237 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 HDGFL3Q9Y3E1 203 aa23.2■■□□□ 1.3
PDCD4-205ENST00000467574 IGHV3-15A0A0B4J1V0 119 aa23.19■■□□□ 1.3
PDCD4-205ENST00000467574 TMEM229AB2RXF0 380 aa23.19■■□□□ 1.3
PDCD4-205ENST00000467574 SMAD9O15198 467 aaKnown RBP23.19■■□□□ 1.3
PDCD4-205ENST00000467574 DCTN3O75935 186 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms