RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 HIST2H2BCQ6DN03 193 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 WBP2NLQ6ICG8 309 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 C6orf89Q6UWU4 347 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 ARPINQ7Z6K5 226 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 COMTD1Q86VU5 262 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 POU5F2Q8N7G0 328 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 LSMEM1Q8N8F7 131 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZNF563Q8TA94 476 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 RNF128Q8TEB7 428 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 CPNE4Q96A23 557 aaPredicted RBP8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 INTS12Q96CB8 462 aaKnown RBP8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 RCN3Q96D15 328 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 STARD4Q96DR4 205 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 REXO5Q96IC2 774 aaKnown RBP8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 GMPPAQ96IJ6 420 aaPredicted RBP8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 HOPXQ9BPY8 73 aaPredicted RBP8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 SRXN1Q9BYN0 137 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 C12orf10Q9HB07 376 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 CACYBPQ9HB71 228 aaKnown RBP8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 TIGARQ9NQ88 270 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 GLRX2Q9NS18 164 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 FOXD3Q9UJU5 478 aaPredicted RBP8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 OSGIN1Q9UJX0 560 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 MCTS1Q9ULC4 181 aaKnown RBP8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 TRAPPC4Q9Y296 219 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 ARL2BPQ9Y2Y0 163 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 HDGFL3Q9Y3E1 203 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 SPIN1Q9Y657 262 aaPredicted RBP8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 MPDZO75970 2070 aa8.48□□□□□ -1.05
SDCCAG3-208ENST00000466579 TMED7-TICAM2A0A0A6YYA0 188 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 A8MXE2 369 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 FAM220BPB1ANY3 271 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 TMEM229AB2RXF0 380 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 MSTNO14793 375 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 HNRNPRO43390 633 aaKnown RBP8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 NPIPB7O75200 414 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 SYNGR4O95473 234 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 PMS2P2O95744 297 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 LGI1O95970 557 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 OPN1LWP04000 364 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 CD8BP10966 210 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 TACR3P29371 465 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 PEX19P40855 299 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 KCNJ5P48544 419 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 AGFG1P52594 562 aaKnown RBP8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 SGCBQ16585 318 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 NRF1Q16656 503 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 GLIPR1L2Q4G1C9 344 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 INTS11Q5TA45 600 aaKnown RBP8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZNF787Q6DD87 383 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 ERICH5Q6P6B1 374 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 TMPPEQ6ZT21 453 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 FAM214BQ7L5A3 538 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 P4HA3Q7Z4N8 544 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 PATL1Q86TB9 770 aaKnown RBP8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 ATG4DQ86TL0 474 aaPredicted RBP8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 ARMC8Q8IUR7 673 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 DMRTC2Q8IXT2 367 aaPredicted RBP8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 SLC15A3Q8IY34 581 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 GCNT2Q8N0V5 402 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 GPR32P1Q8NGA4 272 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 RNASE6Q93091 150 aaKnown RBP8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 C3orf49Q96BT1 292 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 TAMM41Q96BW9 452 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 CMTM5Q96DZ9 223 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 CCT8L2Q96SF2 557 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 ARHGDIGQ99819 225 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 ECSITQ9BQ95 431 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 POTEKPQ9BYX7 375 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 FAM107BQ9H098 131 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 EFCAB1Q9HAE3 211 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 CMTM6Q9NX76 183 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 ING1Q9UK53 422 aaPredicted RBP8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 PACSIN3Q9UKS6 424 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 TMED7Q9Y3B3 224 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 DCHS2Q6V1P9 2916 aa8.47□□□□□ -1.05
SDCCAG3-208ENST00000466579 A0A1W2PNR3 127 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 TMEM72A0PK05 275 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 M0QX08 132 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 TPST2O60704 377 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 CYTIPO60759 359 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 FMO6PO60774 539 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 FAM107AO95990 144 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 CD247P20963 164 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 HTR2AP28223 471 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 SLC7A1P30825 629 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 DIO1P49895 249 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 COPZ1P61923 177 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 CSNK2A1P68400 391 aaPredicted RBP8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 H3F3AP84243 136 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 SORDQ00796 357 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 MYBPHQ13203 477 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 PDK3Q15120 406 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 RNPS1Q15287 305 aaKnown RBP8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 DUSP7Q16829 419 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 GTF2IRD2BQ6EKJ0 949 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 ABLIM2Q6H8Q1 611 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 VWA1Q6PCB0 445 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 BTLAQ7Z6A9 289 aa8.46□□□□□ -1.06
SDCCAG3-208ENST00000466579 GTF2IRD2Q86UP8 949 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms