RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SPAG4Q9NPE6 437 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 TMEM181Q9P2C4 612 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 ZNF629Q9UEG4 869 aaPredicted RBP18.22■□□□□ 0.51
SKA3-205ENST00000465471 PLEKHB1Q9UF11 243 aaPredicted RBP18.22■□□□□ 0.51
SKA3-205ENST00000465471 TESQ9UGI8 421 aaKnown RBP18.22■□□□□ 0.51
SKA3-205ENST00000465471 SPIN1Q9Y657 262 aaPredicted RBP18.22■□□□□ 0.51
SKA3-205ENST00000465471 TMED7-TICAM2A0A0A6YYA0 188 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 ZNF208O43345 1280 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 TPST2O60704 377 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 AQP8O94778 261 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 IL18BPO95998 194 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 FCGR2AP12318 317 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 CTSSP25774 331 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 CLK1P49759 484 aaKnown RBP18.21■□□□□ 0.51
SKA3-205ENST00000465471 GSK3BP49841 420 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 COPZ1P61923 177 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 TFF3Q07654 80 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 ZNF239Q16600 458 aaKnown RBP18.21■□□□□ 0.51
SKA3-205ENST00000465471 ATP6V1C2Q8NEY4 427 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 RASSF5Q8WWW0 418 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 OSTF1Q92882 214 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 CPNE4Q96A23 557 aaPredicted RBP18.21■□□□□ 0.51
SKA3-205ENST00000465471 KLHL28Q9NXS3 571 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 TMED7Q9Y3B3 224 aa18.21■□□□□ 0.51
SKA3-205ENST00000465471 FLNBO75369 2602 aaKnown RBP18.2■□□□□ 0.5
SKA3-205ENST00000465471 A0A1W2PNR3 127 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 TMEM72A0PK05 275 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 CRHP06850 196 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 TMIGD3P0DMS9 266 aaPredicted RBP18.2■□□□□ 0.5
SKA3-205ENST00000465471 SLC7A1P30825 629 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 CARD18P57730 90 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 RGS8P57771 180 aaPredicted RBP18.2■□□□□ 0.5
SKA3-205ENST00000465471 FOXF2Q12947 444 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 SGCBQ16585 318 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 SLC25A35Q3KQZ1 300 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 OR2A2Q6IF42 318 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 C6orf89Q6UWU4 347 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 ATG4DQ86TL0 474 aaPredicted RBP18.2■□□□□ 0.5
SKA3-205ENST00000465471 PGAM4Q8N0Y7 254 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 CADM2Q8N3J6 435 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 RELL2Q8NC24 303 aaPredicted RBP18.2■□□□□ 0.5
SKA3-205ENST00000465471 SFXN3Q9BWM7 321 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 MCTS1Q9ULC4 181 aaKnown RBP18.2■□□□□ 0.5
SKA3-205ENST00000465471 ADGRG4Q8IZF6 3080 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 HCFC1P51610 2035 aa18.2■□□□□ 0.5
SKA3-205ENST00000465471 DVL2O14641 736 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 FMO6PO60774 539 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 TNFSF13O75888 250 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 FESP07332 822 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 KDELR2P33947 212 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 RAC3P60763 192 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 NPTX1Q15818 432 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 TMPPEQ6ZT21 453 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 P4HA3Q7Z4N8 544 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 LSRQ86X29 649 aaPredicted RBP18.19■□□□□ 0.5
SKA3-205ENST00000465471 GCNT2Q8N0V5 402 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 OR4D11Q8NGI4 311 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 RNF128Q8TEB7 428 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 INTS12Q96CB8 462 aaKnown RBP18.19■□□□□ 0.5
SKA3-205ENST00000465471 ARL5BQ96KC2 179 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 OR5B2Q96R09 309 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 UCK2Q9BZX2 261 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 TRIM2Q9C040 744 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 OR11A1Q9GZK7 315 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 C12orf10Q9HB07 376 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 TIGARQ9NQ88 270 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 SLC13A4Q9UKG4 626 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 HDGFL3Q9Y3E1 203 aa18.19■□□□□ 0.5
SKA3-205ENST00000465471 MPDZO75970 2070 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 A0A1B0GWA3 101 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 A0A1W2PNV4 684 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 FAM90A27PA6NNH2 459 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 M0R3H8 397 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 SYNGR4O95473 234 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 PMS2P2O95744 297 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 HTR1EP28566 365 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 GRNP28799 593 aaKnown RBP18.18■□□□□ 0.5
SKA3-205ENST00000465471 OPRM1P35372 400 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 DIO1P49895 249 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 MYBPHQ13203 477 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 FXNQ16595 210 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 ACBD4Q8NC06 268 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 OR6T1Q8NGN1 323 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 SLC26A7Q8TE54 656 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 ZNF559Q9BR84 538 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 JKAMPQ9P055 326 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 NBPF19A0A087WUL8 3843 aa18.18■□□□□ 0.5
SKA3-205ENST00000465471 A0A0B4J2E0 115 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 A0A1B0GX12 115 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 ZC3H12DA2A288 527 aaKnown RBP18.17■□□□□ 0.5
SKA3-205ENST00000465471 NKX2-6A6NCS4 301 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 PRSS44E7EML9 344 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 DNPH1O43598 174 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 NPIPB7O75200 414 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 IFNA14P01570 189 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 T-ENOLP0DO92 83 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 BMP5P22003 454 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 CXCR1P25024 350 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 CPOXP36551 454 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 MNAT1P51948 309 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms