RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 MPDZO75970 2070 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 FLNBO75369 2602 aaKnown RBP15.24■□□□□ 0.03
USP39-211ENST00000465282 LRRK2Q5S007 2527 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 A0A0J9YW62 118 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 HSPB2A8KAH6 182 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 FRS3O43559 492 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 IL2RAP01589 272 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 PNMTP11086 282 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 FCGR2AP12318 317 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 SFTPDP35247 375 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 NUP107P57740 925 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 SRSF1Q07955 248 aaKnown RBP eCLIP15.23■□□□□ 0.033e-6■■■■■ 29.6
USP39-211ENST00000465282 BNIP2Q12982 314 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 HSPB2Q16082 182 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 DNAL1Q4LDG9 190 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 SYT14P1Q58G82 188 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 GLYATQ6IB77 296 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 OR2A2Q6IF42 318 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 ZNF613Q6PF04 617 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 ULK3Q6PHR2 472 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 C6orf89Q6UWU4 347 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 CBLL1Q75N03 491 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 OR10D3Q8NH80 312 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 ASB5Q8WWX0 329 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 DDIT4LQ96D03 193 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 POLR2J2Q9GZM3 115 aaKnown RBP15.23■□□□□ 0.03
USP39-211ENST00000465282 POLR2J3Q9H1A7 115 aaKnown RBP15.23■□□□□ 0.03
USP39-211ENST00000465282 MUC13Q9H3R2 512 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 TMEM185BQ9H7F4 350 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 SELENONQ9NZV5 590 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 CLCF1Q9UBD9 225 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 MCTS1Q9ULC4 181 aaKnown RBP15.23■□□□□ 0.03
USP39-211ENST00000465282 SH3GLB1Q9Y371 365 aa15.23■□□□□ 0.03
USP39-211ENST00000465282 SLC22A20A6NK97 555 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 TNFSF11O14788 317 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 DNPH1O43598 174 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 CEACAM8P31997 349 aaPredicted RBP15.22■□□□□ 0.03
USP39-211ENST00000465282 EIF1AXP47813 144 aaKnown RBP15.22■□□□□ 0.03
USP39-211ENST00000465282 RAC3P60763 192 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 CSNK2A1P68400 391 aaPredicted RBP15.22■□□□□ 0.03
USP39-211ENST00000465282 ADORA2A-AS1P86434 159 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 BNIP1Q12981 228 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 POMZP3Q6PJE2 187 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 C5orf46Q6UWT4 87 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 ATG4DQ86TL0 474 aaPredicted RBP15.22■□□□□ 0.03
USP39-211ENST00000465282 MARVELD2Q8N4S9 558 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 ZNF808Q8N4W9 903 aaPredicted RBP15.22■□□□□ 0.03
USP39-211ENST00000465282 RNF148Q8N7C7 305 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 ATP6V1C2Q8NEY4 427 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 OR6T1Q8NGN1 323 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 OSTF1Q92882 214 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 SLC38A4Q969I6 547 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 CPNE4Q96A23 557 aaPredicted RBP15.22■□□□□ 0.03
USP39-211ENST00000465282 FAM162AQ96A26 154 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 C3orf49Q96BT1 292 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 SLC47A1Q96FL8 570 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 MCHR1Q99705 422 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 POTEKPQ9BYX7 375 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 GMPR2Q9P2T1 348 aaKnown RBP15.22■□□□□ 0.03
USP39-211ENST00000465282 EGFL7Q9UHF1 273 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 SAMD4AQ9UPU9 718 aaKnown RBP15.22■□□□□ 0.03
USP39-211ENST00000465282 TRAPPC4Q9Y296 219 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 SNX13Q9Y5W8 968 aa15.22■□□□□ 0.03
USP39-211ENST00000465282 DOPEY1Q5JWR5 2465 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 A0A1B0GWA3 101 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 A8MVM7 634 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 TMEM229AB2RXF0 380 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 H0YC42 278 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 M0R3H8 397 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 GYG2O15488 501 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 RCBTB2O95199 551 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 SYNGR4O95473 234 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 CRHP06850 196 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 TFPIP10646 304 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 HTR2AP28223 471 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 CHRNB4P30926 498 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 TPD52P55327 224 aaPredicted RBP15.21■□□□□ 0.03
USP39-211ENST00000465282 HOXC5Q00444 222 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 CEACAM7Q14002 265 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 OR1Q1Q15612 314 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 ALG10BQ5I7T1 473 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 GTF2IRD2BQ6EKJ0 949 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 TMPPEQ6ZT21 453 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 SEM1Q6ZVN7 128 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 P4HA3Q7Z4N8 544 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 GTF2IRD2Q86UP8 949 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 CARM1Q86X55 608 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 RPRMLQ8N4K4 120 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 OR10Q1Q8NGQ4 319 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 STK35Q8TDR2 534 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 POP5Q969H6 163 aaKnown RBP15.21■□□□□ 0.03
USP39-211ENST00000465282 TPD52L3Q96J77 140 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 OR5B2Q96R09 309 aa15.21■□□□□ 0.03
USP39-211ENST00000465282 DCAF13Q9NV06 445 aaKnown RBP15.21■□□□□ 0.03
USP39-211ENST00000465282 ZNF629Q9UEG4 869 aaPredicted RBP15.21■□□□□ 0.03
USP39-211ENST00000465282 INTS1Q8N201 2190 aaKnown RBP15.2■□□□□ 0.02
USP39-211ENST00000465282 A0A0B4J2E0 115 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 A0A1B0GX12 115 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 ELOA3DA6NLF2 546 aaPredicted RBP15.2■□□□□ 0.02
USP39-211ENST00000465282 TPST2O60704 377 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms