RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-205	ENST00000464870	PODNL1	Q6PEZ8	512 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	ZNF613	Q6PF04	617 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	POMZP3	Q6PJE2	187 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	MEX3D	Q86XN8	651 aa	Known RBP	11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	EPHX4	Q8IUS5	362 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	P3H2	Q8IVL5	708 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	FAM109A	Q8N4B1	249 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	TMEM251	Q8N6I4	163 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	OR5K1	Q8NHB7	308 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	POC1B	Q8TC44	478 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	C1GALT1C1	Q96EU7	318 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	ALPK1	Q96QP1	1244 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	CIB1	Q99828	191 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	FUZ	Q9BT04	418 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	OAZ3	Q9UMX2	235 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870		A0A1W2PRQ8	180 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	FAAH	O00519	579 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	ZIC3	O60481	467 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	CBR3	O75828	277 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	AGFG2	O95081	481 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	STS	P08842	583 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	UQCRB	P14927	111 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	ABO	P16442	354 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	PRKCA	P17252	672 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	HK1	P19367	917 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	FPR1	P21462	350 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	DPP4	P27487	766 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	IFNA8	P32881	189 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	SLC1A3	P43003	542 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	MAGEA5	P43359	124 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	SMIM11A	P58511	58 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	MERTK	Q12866	999 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	FOXF1	Q12946	379 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	DGCR6	Q14129	220 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	TOMM20	Q15388	145 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	PLPPR5	Q32ZL2	321 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	ALG10B	Q5I7T1	473 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	DCST1	Q5T197	706 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	ULK3	Q6PHR2	472 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	SHQ1	Q6PI26	577 aa	Known RBP	11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	ATG4D	Q86TL0	474 aa	Predicted RBP	11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	STK32C	Q86UX6	486 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	FAM26E	Q8N5C1	309 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	OR9Q2	Q8NGE9	314 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	SLC7A13	Q8TCU3	470 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	TMEM255B	Q8WV15	326 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	DTNBP1	Q96EV8	351 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	EPYC	Q99645	322 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	SLC29A1	Q99808	456 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	POLR2J2	Q9GZM3	115 aa	Known RBP	11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	ADAM19	Q9H013	955 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	POLR2J3	Q9H1A7	115 aa	Known RBP	11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	LDAH	Q9H6V9	325 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	PTGES2	Q9H7Z7	377 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	COQ10B	Q9H8M1	238 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	ZDHHC11	Q9H8X9	412 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	QPCTL	Q9NXS2	382 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	SELENON	Q9NZV5	590 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	PDP1	Q9P0J1	537 aa	Predicted RBP	11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	OSGIN1	Q9UJX0	560 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	RPH3A	Q9Y2J0	694 aa	Predicted RBP	11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870	C15orf41	Q9Y2V0	281 aa		11.14	□□□□□ -0.63
PTPN7-205	ENST00000464870		A0A087WUU8	490 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	TRGV8	A0A0C4DH27	118 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870		A0A1B0GTH9	108 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870		A0A1B0GUH1	482 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	SH3PXD2B	A1X283	911 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870		G3V2T6	193 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	SOCS2	O14508	198 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	CASQ2	O14958	399 aa	Predicted RBP	11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	CHP2	O43745	196 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	EFNA2	O43921	213 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	PIP5K1C	O60331	668 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	SLC19A2	O60779	497 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	TRAPPC6A	O75865	159 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	CCNB2	O95067	398 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	THRB	P10828	461 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	IL11	P20809	199 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	GDF1	P27539	372 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	ZNF41	P51814	821 aa	Predicted RBP	11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	UGT2B15	P54855	530 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	DSCR4	P56555	118 aa	Predicted RBP	11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	HSF1	Q00613	529 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	SNCB	Q16143	134 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	MICA	Q29983	383 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	OTUD3	Q5T2D3	398 aa	Predicted RBP	11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	ARHGAP11A	Q6P4F7	1023 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	LINC00114	Q6XXX2	140 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	GRINA	Q7Z429	371 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	YRDC	Q86U90	279 aa	Known RBP	11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	ADGRG3	Q86Y34	549 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	ATP6V1C2	Q8NEY4	427 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	GIPC3	Q8TF64	312 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	TMEM234	Q8WY98	164 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	ST8SIA1	Q92185	356 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	SLC38A4	Q969I6	547 aa		11.13	□□□□□ -0.63
PTPN7-205	ENST00000464870	EME1	Q96AY2	570 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms