RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CCL26Q9Y258 94 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ATG4BQ9Y4P1 393 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 HRH3Q9Y5N1 445 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 TBC1D3EA0A087X179 549 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 TBC1D3KA0A087X1G2 549 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 A0A1B0GW55 424 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 TBC1D3BA6NDS4 549 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 TBC1D3FA6NER0 549 aaPredicted RBP6.74□□□□□ -1.33
USP48-206ENST00000464577 C4orf51C9J302 202 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 KPNA3O00505 521 aaPredicted RBP6.74□□□□□ -1.33
USP48-206ENST00000464577 MID1O15344 667 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 FCMRO60667 390 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 KHDRBS3O75525 346 aaKnown RBP6.74□□□□□ -1.33
USP48-206ENST00000464577 LDOC1O95751 146 aaPredicted RBP6.74□□□□□ -1.33
USP48-206ENST00000464577 IFNGP01579 166 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 PRNPP04156 253 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 DUX4L2P0CJ85 424 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 DUX4L3P0CJ86 424 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 DUX4L4P0CJ87 422 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 DUX4L5P0CJ88 424 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 DUX4L6P0CJ89 424 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 DUX4L7P0CJ90 424 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 RPS4Y1P22090 263 aaKnown RBP6.74□□□□□ -1.33
USP48-206ENST00000464577 DPP4P27487 766 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 NOS3P29474 1203 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 CD96P40200 585 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 BCL6P41182 706 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 PRDX1Q06830 199 aaKnown RBP6.74□□□□□ -1.33
USP48-206ENST00000464577 DUSP8Q13202 625 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 GGTLC2Q14390 218 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 AGERQ15109 404 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 ARHGAP11BQ3KRB8 267 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 TBC1D3GQ6DHY5 549 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 MFSD12Q6NUT3 480 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 APOOLQ6UXV4 268 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 THSD4Q6ZMP0 1018 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 WDR88Q6ZMY6 472 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 SSX6Q7RTT6 188 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 PDZD9Q8IXQ8 264 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 CDK20Q8IZL9 346 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 ACOT4Q8N9L9 421 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 POMGNT2Q8NAT1 580 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 RPS4Y2Q8TD47 263 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 FCAMRQ8WWV6 532 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 NSMAFQ92636 917 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 PEX11GQ96HA9 241 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 COX14Q96I36 57 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 TRMT61BQ9BVS5 477 aaKnown RBP6.74□□□□□ -1.33
USP48-206ENST00000464577 ENKD1Q9H0I2 346 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 OR51V1Q9H2C8 321 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 KLHL31Q9H511 634 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 RYDENQ9NUL5 291 aaKnown RBP6.74□□□□□ -1.33
USP48-206ENST00000464577 CLDND1Q9NY35 253 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 DUX4Q9UBX2 424 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 SIGLEC7Q9Y286 467 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 AK6Q9Y3D8 172 aaKnown RBP6.74□□□□□ -1.33
USP48-206ENST00000464577 WDR45Q9Y484 360 aa6.74□□□□□ -1.33
USP48-206ENST00000464577 KLF2Q9Y5W3 355 aaPredicted RBP6.74□□□□□ -1.33
USP48-206ENST00000464577 IGKV1-8A0A0C4DH67 115 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 MPTX1A8MV57 137 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 D6RAR5 112 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ACOT7O00154 380 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ERI3O43414 337 aaKnown RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 CXCL10P02778 98 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ADRB1P08588 477 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 RAB40ALP0C0E4 278 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 OR2T7P0C7T2 308 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 C8orf89P0DMQ9 161 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 CALCBP10092 127 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 POU3F2P20265 443 aaPredicted RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 RAB3AP20336 220 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 SDHBP21912 280 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 HTR2AP28223 471 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 NDUFS1P28331 727 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 PTH2RP49190 550 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 SLC16A1P53985 500 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 KIAA1024LP59773 190 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 SIRPAP78324 504 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 SIM1P81133 766 aaPredicted RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 FLI1Q01543 452 aaPredicted RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 CRMP1Q14194 572 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 MPPED2Q15777 294 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 LINC00303Q3SY05 128 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 TMEM52BQ4KMG9 183 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 LY6G5CQ5SRR4 150 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 SPOUT1Q5T280 376 aaKnown RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 METRNLQ641Q3 311 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 C18orf63Q68DL7 685 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 MTFR2Q6P444 385 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ARHGAP11AQ6P4F7 1023 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 LRFN4Q6PJG9 635 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 GSG1LQ6UXU4 331 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ADAMTSL4Q6UY14 1074 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 DNM1P46Q6ZS02 220 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 SYT9Q86SS6 491 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 LRRTM4Q86VH4 590 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 NRROSQ86YC3 692 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 CDH26Q8IXH8 852 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 LINC00518Q8N0U6 118 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 LINC01555Q8NAE3 123 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms