RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 EVA1AQ9H8M9 152 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 KCNJ16Q9NPI9 418 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 PLEKHB1Q9UF11 243 aaPredicted RBP13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 MCTS1Q9ULC4 181 aaKnown RBP13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 TMED7Q9Y3B3 224 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 KLF2Q9Y5W3 355 aaPredicted RBP13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 FLNBO75369 2602 aaKnown RBP13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 ASH1LQ9NR48 2969 aaKnown RBP13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 A0A1W2PNR3 127 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 PRSS44E7EML9 344 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 SYT5O00445 386 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 DVL2O14641 736 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 ZNF208O43345 1280 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 LGI1O95970 557 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 TFPIP10646 304 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 FCGR2AP12318 317 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 BMP5P22003 454 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 CXCR1P25024 350 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 OPRM1P35372 400 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 CLK1P49759 484 aaKnown RBP13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 RGS8P57771 180 aaPredicted RBP13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 FOXF2Q12947 444 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 SYT14P1Q58G82 188 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 GPR32P1Q8NGA4 272 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 CPNE4Q96A23 557 aaPredicted RBP13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 OR5B2Q96R09 309 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 ALG2Q9H553 416 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 COQ10BQ9H8M1 238 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 RNF122Q9H9V4 155 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 SPAG4Q9NPE6 437 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 TMEM181Q9P2C4 612 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 GMPR2Q9P2T1 348 aaKnown RBP13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 ABCD2Q9UBJ2 740 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 INTS1Q8N201 2190 aaKnown RBP13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 CACNA1CQ13936 2221 aa13.01□□□□□ -0.33
SQSTM1-205ENST00000464493 TMEM72A0PK05 275 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 NKX2-6A6NCS4 301 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 FAM90A27PA6NNH2 459 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 GSTA4O15217 222 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 AQP8O94778 261 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 IL18BPO95998 194 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 IFNA14P01570 189 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 CRHP06850 196 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 FESP07332 822 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 CD247P20963 164 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 KDELR2P33947 212 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 GSK3BP49841 420 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 MNAT1P51948 309 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 AGFG1P52594 562 aaKnown RBP13□□□□□ -0.33
SQSTM1-205ENST00000464493 CRYBA2P53672 197 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 RAC3P60763 192 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 NCALDP61601 193 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 SLC25A35Q3KQZ1 300 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 EEF1A1P5Q5VTE0 462 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 TMPPEQ6ZT21 453 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 GCNT2Q8N0V5 402 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 LSMEM1Q8N8F7 131 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 OR52E4Q8NGH9 312 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 DDIT4LQ96D03 193 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 NSL1Q96IY1 281 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 ARHGDIGQ99819 225 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 WFDC6Q9BQY6 131 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 ZNF559Q9BR84 538 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 SFXN3Q9BWM7 321 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 PRR14Q9BWN1 585 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 SRXN1Q9BYN0 137 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 TRIM2Q9C040 744 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 OR11A1Q9GZK7 315 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 ADA2Q9NZK5 511 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 RPS6KB2Q9UBS0 482 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 TESQ9UGI8 421 aaKnown RBP13□□□□□ -0.33
SQSTM1-205ENST00000464493 HDGFL3Q9Y3E1 203 aa13□□□□□ -0.33
SQSTM1-205ENST00000464493 M0R3H8 397 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 SULT2B1O00204 365 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 TPST2O60704 377 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 HTR2AP28223 471 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 DIO1P49895 249 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 CSNK2A1P68400 391 aaPredicted RBP12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 MXRA7P84157 204 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 SLC25A3Q00325 362 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 MYBPHQ13203 477 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 ZNF239Q16600 458 aaKnown RBP12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 NRF1Q16656 503 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 GTF2IRD2BQ6EKJ0 949 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 GTF2IRD2Q86UP8 949 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 RANBP3LQ86VV4 465 aaPredicted RBP12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 PGAM4Q8N0Y7 254 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 ROBO4Q8WZ75 1007 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 C3orf49Q96BT1 292 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 ARL5BQ96KC2 179 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 KCTD14Q9BQ13 255 aaPredicted RBP12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 TMEM27Q9HBJ8 222 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 CHST11Q9NPF2 352 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 NDE1Q9NXR1 346 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 BAG5Q9UL15 447 aa12.99□□□□□ -0.33
SQSTM1-205ENST00000464493 A0A1B0GWA3 101 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 A0A1W2PNV4 684 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 B2RBV5 119 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 CXCR6O00574 342 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 TNFSF13O75888 250 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms