RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ANKRD34BA5PLL1 514 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 ZNF705EA8MWA4 302 aaPredicted RBP8.44□□□□□ -1.06
HPS4-208ENST00000464362 SEMA4FO95754 770 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 GPR75O95800 540 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 PRSS3P35030 304 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 OR10A3P58181 314 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 FAPQ12884 760 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 TRAM1Q15629 374 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 GARNL3Q5VVW2 1013 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 DHRS4L2Q6PKH6 230 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 DPY19L4Q7Z388 723 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 TMEM156Q8N614 296 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 TMIEQ8NEW7 156 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 ABHD4Q8TB40 342 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 NXPE2Q96DL1 559 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 CPNE2Q96FN4 548 aaPredicted RBP8.44□□□□□ -1.06
HPS4-208ENST00000464362 NRSN2Q9GZP1 204 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 SYT4Q9H2B2 425 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 ZNF646O15015 1829 aaPredicted RBP8.44□□□□□ -1.06
HPS4-208ENST00000464362 FOCADQ5VW36 1801 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 A0A1B0GWA3 101 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 C17orf105B2RV13 164 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 SIX6O95475 246 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 CSTBP04080 98 aaKnown RBP8.44□□□□□ -1.06
HPS4-208ENST00000464362 HNRNPA2B1P22626 353 aaKnown RBP8.44□□□□□ -1.06
HPS4-208ENST00000464362 RBM34P42696 430 aaKnown RBP8.44□□□□□ -1.06
HPS4-208ENST00000464362 CBX5P45973 191 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 HTR3AP46098 478 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 VEGFCP49767 419 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 FOXK2Q01167 660 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 SPOCK1Q08629 439 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 SIAH3Q8IW03 269 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 CLDN22Q8N7P3 220 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 GABARAPL3Q9BY60 117 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 ULBP3Q9BZM4 244 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 DISC1C4P0D8 188 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 SLC16A7O60669 478 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 SCGNO76038 276 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 KCNK2O95069 426 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 ELK1P19419 428 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 GRK5P34947 590 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 GDNFP39905 211 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 DHPSP49366 369 aaPredicted RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 SNU13P55769 128 aaKnown RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 LSM11P83369 360 aaKnown RBP eCLIP8.43□□□□□ -1.06
HPS4-208ENST00000464362 RASGEF1BQ0VAM2 473 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 PDE7AQ13946 482 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 MAPK14Q16539 360 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 EOGTQ5NDL2 527 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 YOD1Q5VVQ6 348 aaPredicted RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 DNM1P34Q6PK57 102 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 TMEM151BQ8IW70 566 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 SPAG16Q8N0X2 631 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 SNX18Q96RF0 628 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 TSNAXQ99598 290 aaKnown RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 ACTR6Q9GZN1 396 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 MKRN2Q9H000 416 aaKnown RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 ADAM18Q9Y3Q7 739 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 OR51B4Q9Y5P0 310 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 V9GY05 133 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 KDM4EB2RXH2 506 aaPredicted RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 AGPAT2O15120 278 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 MTRF1O75570 445 aaKnown RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 NTN1O95631 604 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 CLUP10909 449 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 CFL1P23528 166 aaKnown RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 SFTPDP35247 375 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 RIDAP52758 137 aaKnown RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 POU4F2Q12837 409 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 FGL2Q14314 439 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 DEFB133Q30KQ1 61 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 FAAP20Q6NZ36 180 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 SLC48A1Q6P1K1 146 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 LRRC56Q8IYG6 542 aaPredicted RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 UBQLNLQ8IYU4 475 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 KDM8Q8N371 416 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 FBXL6Q8N531 539 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 ANKRD53Q8N9V6 530 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 PNLDC1Q8NA58 520 aaKnown RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 SLC25A46Q96AG3 418 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 PIGUQ9H490 435 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 NOX3Q9HBY0 568 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 A4GALTQ9NPC4 353 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 POLE3Q9NRF9 147 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 CPNE7Q9UBL6 633 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 TMEM14AQ9Y6G1 99 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 ANKRD31Q8N7Z5 1873 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 CCDC85CA6NKD9 419 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 GAPDHSO14556 408 aaPredicted RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 RAB3DO95716 219 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 LGI1O95970 557 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 IL32P24001 234 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 EPHA5P54756 1037 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 REEP5Q00765 189 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 CDK10Q15131 360 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 ABCA11PQ4W5N1 156 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 LHX8Q68G74 356 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 PLCZ1Q86YW0 608 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 MFSD4AQ8N468 514 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 OR5T2Q8NGG2 359 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms