RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 HDGFL3Q9Y3E1 203 aa12.63□□□□□ -0.39
SMC1A-204ENST00000463684 ANKRD28O15084 1053 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 DNPH1O43598 174 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 DNAJA2O60884 412 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 VENTXO95231 258 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 CSTAP01040 98 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 OR4A8P0C604 315 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 DAOP14920 347 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 GIFP27352 417 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 CASQ1P31415 396 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 IDH3GP51553 393 aaPredicted RBP12.62□□□□□ -0.39
SMC1A-204ENST00000463684 OR2B6P58173 313 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 SLC25A3Q00325 362 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 SKP2Q13309 424 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 GPR68Q15743 365 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 ZSWIM7Q19AV6 140 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 RFTN2Q52LD8 501 aaPredicted RBP12.62□□□□□ -0.39
SMC1A-204ENST00000463684 CLEC6AQ6EIG7 209 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 FRMD7Q6ZUT3 714 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 ZNF563Q8TA94 476 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 GCDHQ92947 438 aaPredicted RBP12.62□□□□□ -0.39
SMC1A-204ENST00000463684 DNAJA3Q96EY1 480 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 FCRL1Q96LA6 429 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 SDF2Q99470 211 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 NMUR2Q9GZQ4 415 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 SLC7A10Q9NS82 523 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 CA10Q9NS85 328 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 CHRNA9Q9UGM1 479 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 DCDC2Q9UHG0 476 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 SLC9A8Q9Y2E8 581 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 TMED5Q9Y3A6 229 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 PCDHB14Q9Y5E9 798 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 PTGDR2Q9Y5Y4 395 aa12.62□□□□□ -0.39
SMC1A-204ENST00000463684 MEGF8Q7Z7M0 2845 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 VSTM5A8MXK1 200 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 KLF11O14901 512 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 CRYAAP02489 173 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 TACSTD2P09758 323 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 UBTFL6P0CB48 400 aaPredicted RBP12.61□□□□□ -0.39
SMC1A-204ENST00000463684 NEFHP12036 1026 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 CDH2P19022 906 aaPredicted RBP12.61□□□□□ -0.39
SMC1A-204ENST00000463684 MPGP29372 298 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 IL2RGP31785 369 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 HPCAL1P37235 193 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 RPL3P39023 403 aaKnown RBP12.61□□□□□ -0.39
SMC1A-204ENST00000463684 COMPP49747 757 aaPredicted RBP12.61□□□□□ -0.39
SMC1A-204ENST00000463684 CLK1P49759 484 aaKnown RBP12.61□□□□□ -0.39
SMC1A-204ENST00000463684 PPOXP50336 477 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 RPL38P63173 70 aaKnown RBP12.61□□□□□ -0.39
SMC1A-204ENST00000463684 SCGB2A2Q13296 93 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 TSPO2Q5TGU0 170 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 VHLLQ6RSH7 139 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 ZYG11AQ6WRX3 759 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 RINLQ6ZS11 566 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 EIF3MQ7L2H7 374 aaKnown RBP12.61□□□□□ -0.39
SMC1A-204ENST00000463684 ACMSDQ8TDX5 336 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 NEU4Q8WWR8 484 aaPredicted RBP12.61□□□□□ -0.39
SMC1A-204ENST00000463684 OR5P2Q8WZ92 322 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 ARL5BQ96KC2 179 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 OR7D2Q96RA2 312 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 SNX18Q96RF0 628 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 FMO2Q99518 471 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 PLK3Q9H4B4 646 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 METTL17Q9H7H0 456 aaPredicted RBP12.61□□□□□ -0.39
SMC1A-204ENST00000463684 TNFRSF12AQ9NP84 129 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 CTPS2Q9NRF8 586 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 GPATCH2Q9NW75 528 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 ATP6V1HQ9UI12 483 aa12.61□□□□□ -0.39
SMC1A-204ENST00000463684 PLCE1Q9P212 2302 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 G3V2L1 256 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 EIF1BO60739 113 aaKnown RBP12.6□□□□□ -0.39
SMC1A-204ENST00000463684 LILRA1O75019 489 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 PDE5AO76074 875 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 SLU7O95391 586 aaKnown RBP12.6□□□□□ -0.39
SMC1A-204ENST00000463684 CHEK2O96017 543 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 PAX7P23759 505 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 SLC1A3P43003 542 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 DVL1P1P54792 670 aaPredicted RBP12.6□□□□□ -0.39
SMC1A-204ENST00000463684 CDH15P55291 814 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 EFNB3Q15768 340 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 ADIPOQQ15848 244 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 ZNF141Q15928 474 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 LSM12Q3MHD2 195 aaKnown RBP12.6□□□□□ -0.39
SMC1A-204ENST00000463684 GALNTL6Q49A17 601 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 ZNF572Q7Z3I7 529 aaPredicted RBP12.6□□□□□ -0.39
SMC1A-204ENST00000463684 ABHD12BQ7Z5M8 362 aaPredicted RBP12.6□□□□□ -0.39
SMC1A-204ENST00000463684 OR7A2PQ8NGA2 310 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 OR2T11Q8NH01 316 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 ZNF418Q8TF45 676 aaPredicted RBP12.6□□□□□ -0.39
SMC1A-204ENST00000463684 IFT81Q8WYA0 676 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 MOAP1Q96BY2 351 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 SLC38A2Q96QD8 506 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 NAA11Q9BSU3 229 aaPredicted RBP12.6□□□□□ -0.39
SMC1A-204ENST00000463684 KATNB1Q9BVA0 655 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 CCDC106Q9BWC9 280 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 OBP2BQ9NPH6 170 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 TMEM181Q9P2C4 612 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 TRAPPC4Q9Y296 219 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 FIS1Q9Y3D6 152 aa12.6□□□□□ -0.39
SMC1A-204ENST00000463684 FLVCR1Q9Y5Y0 555 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms