RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 SMPDL3BQ92485 455 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 INSM2Q96T92 566 aaPredicted RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 TRAF4Q9BUZ4 470 aaPredicted RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 SARGQ9BW04 601 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 C1QTNF2Q9BXJ5 285 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 FXYD6Q9H0Q3 95 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 MRPS30Q9NP92 439 aaKnown RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 CA10Q9NS85 328 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 SPHK1Q9NYA1 384 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 SLC17A4Q9Y2C5 497 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 YBX2Q9Y2T7 364 aaKnown RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 MAB21L2Q9Y586 359 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 UNC119BA6NIH7 251 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 SHOXO15266 292 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 PRKNO60260 465 aaPredicted RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 LDB3O75112 727 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 RPN2P04844 631 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 LAMP2P13473 410 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 HIST1H1TP22492 207 aaPredicted RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 MTNR1BP49286 362 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 FNTBP49356 437 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 TUSC1Q2TAM9 212 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 RNLSQ5VYX0 342 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 NIPAL3Q6P499 406 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 FAM198BQ6UWH4 519 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 SNX33Q8WV41 574 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 TIMM29Q9BSF4 260 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 C20orf85Q9H1P6 137 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 ACSS1Q9NUB1 689 aaPredicted RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 ACSL5Q9ULC5 683 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 LRRC72A6NJI9 287 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 CACNB4O00305 520 aaPredicted RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 CEACAM5P06731 702 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 RBMS1P29558 406 aaKnown RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 NUDT1P36639 197 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 BTG1P62324 171 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 TRMT12Q53H54 448 aaKnown RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 OR5M10Q6IEU7 315 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 CD300LDQ6UXZ3 194 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 MTSS1LQ765P7 747 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 IL17RCQ8NAC3 791 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 DNAAF1Q8NEP3 725 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 OR7G2Q8NG99 324 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 OR4E2Q8NGC2 313 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 OR52E2Q8NGJ4 325 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 OR52N1Q8NH53 320 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 OR52I2Q8NH67 350 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 OR4C6Q8NH72 309 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 ST8SIA2Q92186 375 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 RBPMSQ93062 196 aaKnown RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 ELP4Q96EB1 424 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 CAMK1GQ96NX5 476 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 COPS3Q9UNS2 423 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 NUBP2Q9Y5Y2 271 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 LRP4O75096 1905 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 ARHGEF17Q96PE2 2063 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-208ENST00000463007 TRBV2A0A0J9YWF9 115 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 L7N2F9 121 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 HMGN1P05114 100 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 EN2P19622 333 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-208ENST00000463007 C5AR1P21730 350 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 TRA2BP62995 288 aaKnown RBP11.48□□□□□ -0.57
HDAC4-208ENST00000463007 FOXK2Q01167 660 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 SRSF5Q13243 272 aaKnown RBP11.48□□□□□ -0.57
HDAC4-208ENST00000463007 KCNAB1Q14722 419 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 GPR139Q6DWJ6 353 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 TMEM184AQ6ZMB5 413 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 FCRLAQ7L513 359 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 OR51Q1Q8NH59 317 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 ERMAPQ96PL5 475 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-208ENST00000463007 SORCS2Q96PQ0 1159 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 TNFRSF13CQ96RJ3 184 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 TIMP4Q99727 224 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 ZNF436Q9C0F3 470 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-208ENST00000463007 SLC7A5P2Q9GIP4 190 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 DIABLOQ9NR28 239 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 ASB6Q9NWX5 421 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 ZMIZ1Q9ULJ6 1067 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 FAM86C2PA6NEL3 165 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 K7EQS6 105 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 FLRT2O43155 660 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 CLEC3AO75596 197 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 ADH1BP00325 375 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 ACSM4P0C7M7 580 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 EDNRAP25101 427 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 PEBP1P30086 187 aaKnown RBP11.48□□□□□ -0.57
HDAC4-208ENST00000463007 ADH7P40394 386 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 RPS27P42677 84 aaKnown RBP11.48□□□□□ -0.57
HDAC4-208ENST00000463007 MAZP56270 477 aaKnown RBP11.48□□□□□ -0.57
HDAC4-208ENST00000463007 FXYD6P3P58550 94 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 PRDX1Q06830 199 aaKnown RBP11.48□□□□□ -0.57
HDAC4-208ENST00000463007 STX4Q12846 297 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 OPCMLQ14982 345 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 C9orf50Q5SZB4 431 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 KIAA1211LQ6NV74 962 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 CMTM4Q8IZR5 234 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 SDR16C5Q8N3Y7 309 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 LINC00471Q8N535 108 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 ACOT12Q8WYK0 555 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 NARS2Q96I59 477 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms