RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 SPHARQ15513 63 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 DEFB109BQ30KR1 87 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 CRTC2Q53ET0 693 aaPredicted RBP16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 NPSR1Q6W5P4 371 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 CLEC1AQ8NC01 280 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 OR4K5Q8NGD3 323 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 ZCCHC14Q8WYQ9 949 aaKnown RBP16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 CDS1Q92903 461 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 ADIPOR1Q96A54 375 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 SLC35A4Q96G79 324 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 THOC3Q96J01 351 aaKnown RBP16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 LMF2Q9BU23 707 aaKnown RBP16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 CCDC32Q9BV29 185 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 TRIM45Q9H8W5 580 aaPredicted RBP16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 HHATLQ9HCP6 504 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 ATP13A2Q9NQ11 1180 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 ABCB10Q9NRK6 738 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 NDUFB11Q9NX14 153 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 DNAJC27Q9NZQ0 273 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 ZNF229Q9UJW7 825 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 LIPT1Q9Y234 373 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 SSUH2Q9Y2M2 353 aa16.54■□□□□ 0.24
ATPAF2-202ENST00000462733 SOX14O95416 240 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 ADRA2AP08913 450 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 ITGA3P26006 1051 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 ITPKBP27987 946 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 NR0B1P51843 470 aaKnown RBP16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 DEFA1P59665 94 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 DEFA3P59666 94 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 TLE3Q04726 772 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 AIMP2Q13155 320 aaKnown RBP16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 FCRLBQ6BAA4 426 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 CCDC190Q86UF4 302 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 RBM45Q8IUH3 476 aaKnown RBP16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 SNX29P2Q8IUI4 249 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 CYP4Z2PQ8N1L4 340 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 PARP16Q8N5Y8 322 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 NANOGP1Q8N7R0 232 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 OR5L2Q8NGL0 311 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 OR8K3Q8NH51 312 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 TSSK6Q9BXA6 273 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 PRRG3Q9BZD7 231 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 NXF5Q9H1B4 397 aaKnown RBP16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 MAN2C1Q9NTJ4 1040 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 MRPS18AQ9NVS2 196 aaKnown RBP16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 STUB1Q9UNE7 303 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 TRAPPC4Q9Y296 219 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 GPR55Q9Y2T6 319 aaPredicted RBP16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 ANKRD11Q6UB99 2663 aaPredicted RBP16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 GXYLT2A0PJZ3 443 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 SNTNA6NMZ2 147 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 M0R3H8 397 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 WWP2O00308 870 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 RAB36O95755 333 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 CHRM4P08173 479 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 CT45A8P0DMV1 189 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 CT45A9P0DMV2 189 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 MAP3K8P41279 467 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 SMSP52788 366 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 RRADP55042 308 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 CDK5Q00535 292 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 CT45A2Q5DJT8 189 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 EXOSC6Q5RKV6 272 aaKnown RBP16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 STEAP3Q658P3 488 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 SLC34A3Q8N130 599 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 SIRT6Q8N6T7 355 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 TCEANCQ8N8B7 351 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 COX18Q8N8Q8 333 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 OR4N2Q8NGD1 307 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 NUBPLQ8TB37 319 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 BRIX1Q8TDN6 353 aaKnown RBP16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 LCORQ96JN0 433 aaPredicted RBP16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 STACQ99469 402 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 NUAK2Q9H093 628 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 PIGUQ9H490 435 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 OR10H1Q9Y4A9 318 aa16.53■□□□□ 0.24
ATPAF2-202ENST00000462733 TMEM200CA6NKL6 621 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 DUXAA6NLW8 204 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 MYL12BO14950 172 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 TBX1O43435 398 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 GPX5O75715 221 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 NKX2-2O95096 273 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 PSMA1P25786 263 aaKnown RBP16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 PPICP45877 212 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 DCAF7P61962 342 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 FUT5Q11128 374 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 PIN1Q13526 163 aaPredicted RBP16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 KLHL22Q53GT1 634 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 HOXB13Q92826 284 aaPredicted RBP16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 LMF1Q96S06 567 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 ARHGDIGQ99819 225 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 Q9N2J8 555 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 ISYNA1Q9NPH2 558 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 PCDHGB6Q9Y5F9 930 aa16.52■□□□□ 0.24
ATPAF2-202ENST00000462733 CNTRLQ7Z7A1 2325 aa16.51■□□□□ 0.23
ATPAF2-202ENST00000462733 FRG2CA6NGY1 282 aa16.51■□□□□ 0.23
ATPAF2-202ENST00000462733 A6NL46 340 aa16.51■□□□□ 0.23
ATPAF2-202ENST00000462733 ZNF670-ZNF695F2Z2N8 137 aa16.51■□□□□ 0.23
ATPAF2-202ENST00000462733 DRD5P21918 477 aa16.51■□□□□ 0.23
ATPAF2-202ENST00000462733 RFX3P48380 749 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms