RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 TRAV27A0A087WT01 109 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 SNTNA6NMZ2 147 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 GTPBP1O00178 669 aaKnown RBP13.26□□□□□ -0.29
HDAC6-213ENST00000462730 TO15178 435 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 ALOX12BO75342 701 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 UPK1BO75841 260 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 SLC2A10O95528 541 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 RAB36O95755 333 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 TBXA2RP21731 343 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 CLK1P49759 484 aaKnown RBP13.26□□□□□ -0.29
HDAC6-213ENST00000462730 GPR143P51810 404 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 CRYZQ08257 329 aaKnown RBP13.26□□□□□ -0.29
HDAC6-213ENST00000462730 SKP2Q13309 424 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 KRR1Q13601 381 aaKnown RBP13.26□□□□□ -0.29
HDAC6-213ENST00000462730 MED22Q15528 200 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 RPL13AP3Q6NVV1 102 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 LINC00114Q6XXX2 140 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 SLC46A3Q7Z3Q1 461 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 AMER2Q8N7J2 671 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 ZNF441Q8N8Z8 693 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 DNAJA4Q8WW22 397 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-213ENST00000462730 OMA1Q96E52 524 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 RNFT2Q96EX2 444 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 SPSB2Q99619 263 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 CMKLR1Q99788 373 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 MESP1Q9BRJ9 268 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 MMP27Q9H306 513 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 AKIRIN1Q9H9L7 192 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-213ENST00000462730 MED17Q9NVC6 651 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 CLEC2DQ9UHP7 191 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 CARD8Q9Y2G2 431 aa13.26□□□□□ -0.29
HDAC6-213ENST00000462730 KIF26BQ2KJY2 2108 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 SAGE2PA6NJ88 616 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 VSTM2BA6NLU5 285 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 AIREO43918 545 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 HCN1O60741 890 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 BMP7P18075 431 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 LCN1P31025 176 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 GRK5P34947 590 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 UGT2B10P36537 528 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 SMARCD3Q6STE5 483 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 THSD4Q6ZMP0 1018 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 LYSMD2Q8IV50 215 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 IQCF2Q8IXL9 164 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 CHAC2Q8WUX2 184 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 C3orf49Q96BT1 292 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 IFT27Q9BW83 186 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 ULBP3Q9BZM4 244 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 ENKD1Q9H0I2 346 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 DIMT1Q9UNQ2 313 aaKnown RBP13.25□□□□□ -0.29
HDAC6-213ENST00000462730 SIGLEC7Q9Y286 467 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 METTL15A6NJ78 407 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 BHLHE40O14503 412 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 ZNF264O43296 627 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 TSPAN2O60636 221 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 APOL3O95236 402 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 GSTT2P0CG29 244 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 GSTT2BP0CG30 244 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 GADD45AP24522 165 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 EMP2P54851 167 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 CDH11P55287 796 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 CLDN6P56747 220 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 KLHL22Q53GT1 634 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 AADACL4Q5VUY2 407 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 OR51A7Q8NH64 312 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 METTL21AQ8WXB1 218 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 MND1Q9BWT6 205 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 SLC26A1Q9H2B4 701 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 EXOSC3Q9NQT5 275 aaKnown RBP13.25□□□□□ -0.29
HDAC6-213ENST00000462730 ABCB10Q9NRK6 738 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 SLC39A1Q9NY26 324 aa13.25□□□□□ -0.29
HDAC6-213ENST00000462730 LSM2Q9Y333 95 aaKnown RBP13.25□□□□□ -0.29
HDAC6-213ENST00000462730 A0A087WUJ7 227 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 IRGMA1A4Y4 181 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 C4orf47A7E2U8 309 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 TAF4O00268 1085 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 CSO75390 466 aaKnown RBP13.24□□□□□ -0.29
HDAC6-213ENST00000462730 GAS1P54826 345 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 INSM1Q01101 510 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-213ENST00000462730 SELENBP1Q13228 472 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 DOC2BQ14184 412 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 TSTQ16762 297 aaKnown RBP13.24□□□□□ -0.29
HDAC6-213ENST00000462730 ZNF181Q2M3W8 571 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 TMEM44Q2T9K0 475 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 RNLSQ5VYX0 342 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 WBP2NLQ6ICG8 309 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 MRPL14Q6P1L8 145 aaKnown RBP13.24□□□□□ -0.29
HDAC6-213ENST00000462730 PAQR6Q6TCH4 344 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 CBLN3Q6UW01 205 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 OAFQ86UD1 273 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 BBS1Q8NFJ9 593 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 SGTBQ96EQ0 304 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 MGLLQ99685 303 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 CRB3Q9BUF7 120 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 HINT3Q9NQE9 182 aaKnown RBP13.24□□□□□ -0.29
HDAC6-213ENST00000462730 MRPS18AQ9NVS2 196 aaKnown RBP13.24□□□□□ -0.29
HDAC6-213ENST00000462730 AKAP7Q9P0M2 348 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-213ENST00000462730 LOXL2Q9Y4K0 774 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 UGT2A1Q9Y4X1 527 aa13.24□□□□□ -0.29
HDAC6-213ENST00000462730 B4E171 279 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms