RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 VHLP40337 213 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 RHAGQ02094 409 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 SRSF4Q08170 494 aaKnown RBP6.73□□□□□ -1.33
UBE4B-204ENST00000462658 CBFBQ13951 182 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 GNA13Q14344 377 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 EXOSC7Q15024 291 aaKnown RBP6.73□□□□□ -1.33
UBE4B-204ENST00000462658 TRIP10Q15642 601 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 SYPL1Q16563 259 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 CYBRD1Q53TN4 286 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 VWA2Q5GFL6 755 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 ATAD3BQ5T9A4 648 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 ATPAF1Q5TC12 328 aaPredicted RBP6.73□□□□□ -1.33
UBE4B-204ENST00000462658 STPG1Q5TH74 334 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 MFSD12Q6NUT3 480 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 CDC73Q6P1J9 531 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 QSOX2Q6ZRP7 698 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 COX15Q7KZN9 410 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 PIP4P1Q86T03 277 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 PATL1Q86TB9 770 aaKnown RBP6.73□□□□□ -1.33
UBE4B-204ENST00000462658 PRSS58Q8IYP2 241 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 FAM86B1Q8N7N1 296 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 BMPERQ8N8U9 685 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 OR10Q1Q8NGQ4 319 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 SLC38A5Q8WUX1 472 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 GLMPQ8WWB7 406 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 OTUB1Q96FW1 271 aaPredicted RBP6.73□□□□□ -1.33
UBE4B-204ENST00000462658 CMKLR1Q99788 373 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 STRADBQ9C0K7 418 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 MAGIXQ9H6Y5 334 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 YY1AP1Q9H869 796 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 CXorf21Q9HAI6 301 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 ADAP2Q9NPF8 381 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 PNO1Q9NRX1 252 aaKnown RBP6.73□□□□□ -1.33
UBE4B-204ENST00000462658 SLC22A11Q9NSA0 550 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 SLC39A1Q9NY26 324 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 P2RX2Q9UBL9 471 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 ZNF639Q9UID6 485 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 RIMS3Q9UJD0 308 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 KCNE3Q9Y6H6 103 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 COL5A1P20908 1838 aaPredicted RBP6.73□□□□□ -1.33
UBE4B-204ENST00000462658 SPTBP11277 2137 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 IGLV3-12A0A075B6K2 115 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 IGKV3D-11A0A0A0MRZ8 115 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 A8MUA0 341 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 B4E171 279 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 RRHO14718 337 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 CASQ2O14958 399 aaPredicted RBP6.72□□□□□ -1.33
UBE4B-204ENST00000462658 PDE9AO76083 593 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 AGR2O95994 175 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 MT-ND1P03886 318 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 OPN1SWP03999 348 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 ALOX5P09917 674 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 ACP2P11117 423 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 FCGR1AP12314 374 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 RORAP35398 523 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 TSPAN7P41732 249 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 CRYBA2P53672 197 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 CRISP3P54108 245 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 SELENOWP63302 87 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 TRIP6Q15654 476 aaKnown RBP6.72□□□□□ -1.33
UBE4B-204ENST00000462658 NSDHLQ15738 373 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 MAPK11Q15759 364 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 LRRC36Q1X8D7 754 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 ISXQ2M1V0 245 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 GPAT3Q53EU6 434 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 LPCAT4Q643R3 524 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 HMBOX1Q6NT76 420 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 ZCCHC12Q6PEW1 402 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 ANKFN1Q8N957 763 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 CDRT4Q8N9R6 151 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 PLPP5Q8NEB5 264 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 OR52R1Q8NGF1 315 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 BBS10Q8TAM1 723 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 PTPMT1Q8WUK0 201 aaPredicted RBP6.72□□□□□ -1.33
UBE4B-204ENST00000462658 LZICQ8WZA0 190 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 TSLPQ969D9 159 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 TAMM41Q96BW9 452 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 TRMT61AQ96FX7 289 aaKnown RBP6.72□□□□□ -1.33
UBE4B-204ENST00000462658 TPD52L3Q96J77 140 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 ZNF578Q96N58 590 aaPredicted RBP6.72□□□□□ -1.33
UBE4B-204ENST00000462658 ZNF607Q96SK3 696 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 DOHHQ9BU89 302 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 KLHL4Q9C0H6 718 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 VN1R1Q9GZP7 353 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 SEMA6AQ9H2E6 1030 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 VCX3BQ9H321 246 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 PIGUQ9H490 435 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 EXD2Q9NVH0 621 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 C14orf105Q9NVL8 296 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 GIN1Q9NXP7 522 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 IFT80Q9P2H3 777 aaPredicted RBP6.72□□□□□ -1.33
UBE4B-204ENST00000462658 CTSFQ9UBX1 484 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 LIPT1Q9Y234 373 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 LOXL2Q9Y4K0 774 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 PCDHGA1Q9Y5H4 931 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 CHD8Q9HCK8 2581 aa6.72□□□□□ -1.33
UBE4B-204ENST00000462658 TPRP12270 2363 aaKnown RBP6.72□□□□□ -1.33
UBE4B-204ENST00000462658 CELSR3Q9NYQ7 3312 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 A0A0G2JPF8 293 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 FAM149AA5PLN7 773 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms