RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 INTS12Q96CB8 462 aaKnown RBP12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 TMEM19Q96HH6 336 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 ANKRD27Q96NW4 1050 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 HS3ST6Q96QI5 342 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 CGREF1Q99674 301 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 RAD21L1Q9H4I0 556 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 CXorf56Q9H5V9 222 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 KLHL28Q9NXS3 571 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 LEF1Q9UJU2 399 aaPredicted RBP12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 ZNF175Q9Y473 711 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 A0A0G2JPF8 293 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 A0A0J9YW62 118 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 HNRNPCL2B2RXH8 293 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 HNRNPCL3B7ZW38 293 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 H0Y3Z8 333 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 HNRNPCL1O60812 293 aaKnown RBP12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 ANP32DO95626 131 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 DBIP07108 87 aaKnown RBP12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 UBTFL6P0CB48 400 aaPredicted RBP12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 HNRNPCL4P0DMR1 293 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 NR2F1P10589 423 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 TCEA1P23193 301 aaKnown RBP12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 SHC1P29353 583 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 UGT2B10P36537 528 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 CPOXP36551 454 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 CRATP43155 626 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 GZMMP51124 257 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 ZNF41P51814 821 aaPredicted RBP12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 CRISP3P54108 245 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 FAM27E3Q08E93 113 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 CBFBQ13951 182 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 OR2A2Q6IF42 318 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 PLXDC2Q6UX71 529 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 PTOV1Q86YD1 416 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 GCNT2Q8N0V5 402 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 TMEM171Q8WVE6 324 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 MAL2Q969L2 176 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 SLC35B4Q969S0 331 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 ZNF845Q96IR2 970 aaPredicted RBP12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 MED18Q9BUE0 208 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 CCDC106Q9BWC9 280 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 KAT8Q9H7Z6 458 aaKnown RBP12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 COQ10BQ9H8M1 238 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 RNF122Q9H9V4 155 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 ACER3Q9NUN7 267 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 CALML5Q9NZT1 146 aa12.18□□□□□ -0.46
SCAMP4-206ENST00000460767 CR1P17927 2039 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 H3BML4 177 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 CD5LO43866 347 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 GMFGO60234 142 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 GCM2O75603 506 aaPredicted RBP12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 PGM3O95394 542 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 BCHEP06276 602 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 ETS2P15036 469 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 ACAA2P42765 397 aaKnown RBP12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 SEC24CP53992 1094 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 PCBP3P57721 371 aaKnown RBP12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 EEFSECP57772 596 aaKnown RBP12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 SESN3P58005 492 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 SRYQ05066 204 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 TNK1Q13470 666 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 SELPLGQ14242 412 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 QPRTQ15274 297 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 MRPL2Q5T653 305 aaKnown RBP12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 ZNF836Q6ZNA1 936 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 ESPNLQ6ZVH7 1005 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 HMGN2P46Q86SG4 172 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 DHDDSQ86SQ9 333 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 ZNF614Q8N883 585 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 FBXO27Q8NI29 283 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 FIG4Q92562 907 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 STARD4Q96DR4 205 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 THUMPD3Q9BV44 507 aaKnown RBP12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 MYLK2Q9H1R3 596 aa12.17□□□□□ -0.46
SCAMP4-206ENST00000460767 GTPBP1O00178 669 aaKnown RBP12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 ANGPT2O15123 496 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 NPPAP01160 153 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 PGCP20142 388 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 DRD4P21917 467 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 LSP1P33241 339 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 HPCAP84074 193 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 ZSWIM7Q19AV6 140 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 TRMT5Q32P41 509 aaKnown RBP12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 RPS26P11Q5JNZ5 115 aaPredicted RBP12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 ZNF474Q6S9Z5 364 aaPredicted RBP12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 COMTD1Q86VU5 262 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 VRK2Q86Y07 508 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 LILRA2Q8N149 483 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 ZNF611Q8N823 705 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 OR52P1PQ8NH57 321 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 OR10D3Q8NH80 312 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 BBS10Q8TAM1 723 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 WDR60Q8WVS4 1066 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 KLHL15Q96M94 604 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 ADAM19Q9H013 955 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 RLIMQ9NVW2 624 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 CORO2BQ9UQ03 480 aa12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 ZNF443Q9Y2A4 671 aaPredicted RBP12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 CUBNO60494 3623 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms