RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 GAL3ST1Q99999 423 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 DNAJA2O60884 412 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 LAMP1P11279 417 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 ETS2P15036 469 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 PSMB9P28065 219 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 GGTLC2Q14390 218 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 TRAM2Q15035 370 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 CIDECQ96AQ7 238 aaPredicted RBP9.03□□□□□ -0.96
EPB41-208ENST00000460378 CPNE2Q96FN4 548 aaPredicted RBP9.03□□□□□ -0.96
EPB41-208ENST00000460378 HOPXQ9BPY8 73 aaPredicted RBP9.03□□□□□ -0.96
EPB41-208ENST00000460378 TRIM8Q9BZR9 551 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 AKIRIN1Q9H9L7 192 aaPredicted RBP9.03□□□□□ -0.96
EPB41-208ENST00000460378 DUSP22Q9NRW4 184 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 GPR27Q9NS67 375 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 KLHL13Q9P2N7 655 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 ANKRD30BLA7E2S9 258 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 FCGR1AP12314 374 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 ENTPD1P49961 510 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 PDLIM4P50479 330 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 MAP2K6P52564 334 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 ULK3Q6PHR2 472 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 CAMKMTQ7Z624 323 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 ZNF781Q8N8C0 355 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 LINC01560Q8TB33 94 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 HSD17B8Q92506 261 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 NSMAFQ92636 917 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 RAB39BQ96DA2 213 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 ACPTQ9BZG2 426 aa9.03□□□□□ -0.96
EPB41-208ENST00000460378 A8MVM7 634 aa9.02□□□□□ -0.96
EPB41-208ENST00000460378 SOCS6O14544 535 aa9.02□□□□□ -0.96
EPB41-208ENST00000460378 AHCYL1O43865 530 aa9.02□□□□□ -0.96
EPB41-208ENST00000460378 HSMCR30P0CW71 290 aa9.02□□□□□ -0.96
EPB41-208ENST00000460378 HTR6P50406 440 aa9.02□□□□□ -0.96
EPB41-208ENST00000460378 POU3F1Q03052 451 aaPredicted RBP9.02□□□□□ -0.96
EPB41-208ENST00000460378 OR8H2Q8N162 312 aa9.02□□□□□ -0.96
EPB41-208ENST00000460378 BPIFB2Q8N4F0 458 aa9.02□□□□□ -0.96
EPB41-208ENST00000460378 HPS1Q92902 700 aa9.02□□□□□ -0.96
EPB41-208ENST00000460378 PITX2Q99697 317 aa9.02□□□□□ -0.96
EPB41-208ENST00000460378 SSU72Q9NP77 194 aaKnown RBP9.02□□□□□ -0.96
EPB41-208ENST00000460378 SH3D21A4FU49 640 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 ETHE1O95571 254 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 LPLP06858 475 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 IL5RAQ01344 420 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.02□□□□□ -0.97
EPB41-208ENST00000460378 DHFR2Q86XF0 187 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 SCCPDHQ8NBX0 429 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 OR6K6Q8NGW6 343 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 ZNF418Q8TF45 676 aaPredicted RBP9.02□□□□□ -0.97
EPB41-208ENST00000460378 TMEM41AQ96HV5 264 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 RNASET2O00584 256 aaKnown RBP9.02□□□□□ -0.97
EPB41-208ENST00000460378 YES1P07947 543 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 CAMK2BQ13554 666 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 OFCC1Q8IZS5 231 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 LINC00471Q8N535 108 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 BMPERQ8N8U9 685 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 OR10D3Q8NH80 312 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 ACTR6Q9GZN1 396 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 LAT2Q9GZY6 243 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 KCNN3Q9UGI6 736 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 LAMP3Q9UQV4 416 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 MEMO1Q9Y316 297 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 PTGES3LE9PB15 166 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 ANXA2P07355 339 aaKnown RBP9.02□□□□□ -0.97
EPB41-208ENST00000460378 CD99P14209 185 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 ARR3P36575 388 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 PTGR1Q14914 329 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 MSANTD1Q6ZTZ1 278 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 DTX3Q8N9I9 347 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 ZNF566Q969W8 418 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 UCK2Q9BZX2 261 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 GALNT9Q9HCQ5 603 aa9.02□□□□□ -0.97
EPB41-208ENST00000460378 TSC22D2O75157 780 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 MFN2O95140 757 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 H6PDO95479 791 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 NKX6-1P78426 367 aaPredicted RBP9.01□□□□□ -0.97
EPB41-208ENST00000460378 RGS7BPQ6MZT1 257 aaPredicted RBP9.01□□□□□ -0.97
EPB41-208ENST00000460378 MFSD12Q6NUT3 480 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 RBM15BQ8NDT2 890 aaKnown RBP9.01□□□□□ -0.97
EPB41-208ENST00000460378 GEMIN6Q8WXD5 167 aaKnown RBP9.01□□□□□ -0.97
EPB41-208ENST00000460378 COPS4Q9BT78 406 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 PLEK2Q9NYT0 353 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 MAGEL2Q9UJ55 1249 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 RNF6Q9Y252 685 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 NKX2-6A6NCS4 301 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 CH25HO95992 272 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 LCATP04180 440 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 GALNT1Q10472 559 aaPredicted RBP9.01□□□□□ -0.97
EPB41-208ENST00000460378 EBPQ15125 230 aaKnown RBP9.01□□□□□ -0.97
EPB41-208ENST00000460378 HFEQ30201 348 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 ZNF718Q3SXZ3 478 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 SMARCD3Q6STE5 483 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 C16orf47Q6ZP98 133 aaPredicted RBP9.01□□□□□ -0.97
EPB41-208ENST00000460378 TIGD4Q8IY51 512 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 RBMXL3Q8N7X1 1067 aaKnown RBP9.01□□□□□ -0.97
EPB41-208ENST00000460378 OR52N2Q8NGI0 321 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 OR10A6Q8NH74 314 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 TRMT10AQ8TBZ6 339 aaKnown RBP9.01□□□□□ -0.97
EPB41-208ENST00000460378 PRDM7Q9NQW5 492 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 REV1Q9UBZ9 1251 aa9.01□□□□□ -0.97
EPB41-208ENST00000460378 KLF2Q9Y5W3 355 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms