RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 AKAP8O43823 692 aaKnown RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 SUSD5O60279 629 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 EIF1BO60739 113 aaKnown RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 BCAS1O75363 584 aaPredicted RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 SLC34A2O95436 690 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 CH25HO95992 272 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 CLPTM1O96005 669 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 RENP00797 406 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 IGF2P01344 180 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 PRR23D2P0DMB1 279 aaPredicted RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 PRG2P13727 222 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 ZNF3P17036 446 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 AHCYP23526 432 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 ACVR2AP27037 513 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 IDUAP35475 653 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 SOX18P35713 384 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 GGT2P36268 569 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 GPR4P46093 362 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 RPS5P46782 204 aaKnown RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 GIPRP48546 466 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 RNF144AP50876 292 aaPredicted RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 ZNF136P52737 540 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 CRYBA2P53672 197 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 TMPRSS3P57727 454 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 FOXL2P58012 376 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 RPS3AP61247 264 aaKnown RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 RPS7P62081 194 aaKnown RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 SLC35A1P78382 337 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 MYBPC1Q00872 1141 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 SELENBP1Q13228 472 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 MFAP5Q13361 173 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 IL10RAQ13651 578 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 C1DQ13901 141 aaKnown RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 GINS1Q14691 196 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 TGIF1Q15583 401 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 OR1C1Q15619 314 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 DEFB109BQ30KR1 87 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 IQCCQ4KMZ1 466 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 NHSL2Q5HYW2 709 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 GTF2IRD2BQ6EKJ0 949 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 SLC25A25Q6KCM7 469 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 PGBD2Q6P3X8 592 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 ARHGAP11AQ6P4F7 1023 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 TBPL2Q6SJ96 375 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 KLHL17Q6TDP4 642 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 TMPRSS11FQ6ZWK6 438 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 PRICKLE2Q7Z3G6 844 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 TMEM179BQ7Z7N9 219 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 ZAR1Q86SH2 424 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 GTF2IRD2Q86UP8 949 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 VASH2Q86V25 355 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 EPHX4Q8IUS5 362 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 NKAIN4Q8IVV8 208 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 HS3ST5Q8IZT8 346 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 SHISA5Q8N114 240 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 ARMC10Q8N2F6 343 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 STX19Q8N4C7 294 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 CLDN22Q8N7P3 220 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 ZNF540Q8NDQ6 660 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 BPIFB6Q8NFQ5 453 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 OR4C15Q8NGM1 316 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 OR51A7Q8NH64 312 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 FANK1Q8TC84 345 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 GPR119Q8TDV5 335 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 IPCEF1Q8WWN9 437 aaPredicted RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 HDAC2Q92769 488 aaKnown RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 HAS2Q92819 552 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 HGDQ93099 445 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 ZNF775Q96BV0 537 aaPredicted RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 MUS81Q96NY9 551 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 NIPSNAP1Q9BPW8 284 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 GABARAPL3Q9BY60 117 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 PRRG4Q9BZD6 226 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 FKRPQ9H9S5 495 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 GALNT9Q9HCQ5 603 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 RASSF1Q9NS23 344 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 MED17Q9NVC6 651 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 PAQR5Q9NXK6 330 aaPredicted RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 ANKRD10Q9NXR5 420 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 TVP23BQ9NYZ1 205 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 NDUFA13Q9P0J0 144 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 KLHL21Q9UJP4 597 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 ZNF229Q9UJW7 825 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 ZNF223Q9UK11 482 aaPredicted RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 ICAM5Q9UMF0 924 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 SLC6A5Q9Y345 797 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 MAGED1Q9Y5V3 778 aaPredicted RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 CHCHD2Q9Y6H1 151 aaPredicted RBP5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 CDH10Q9Y6N8 788 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 PRUNE2Q8WUY3 3088 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 BDP1A6H8Y1 2624 aa5.32□□□□□ -1.56
RNU1-88P-201ENST00000459274 CACNA1HO95180 2353 aa5.31□□□□□ -1.56
RNU1-88P-201ENST00000459274 OTOGLQ3ZCN5 2332 aa5.31□□□□□ -1.56
RNU1-88P-201ENST00000459274 TTC28Q96AY4 2481 aa5.31□□□□□ -1.56
RNU1-88P-201ENST00000459274 TRAV17A0A0B4J275 112 aa5.31□□□□□ -1.56
RNU1-88P-201ENST00000459274 C7orf72A4D263 438 aa5.31□□□□□ -1.56
RNU1-88P-201ENST00000459274 PMS2P1A4D2B8 440 aa5.31□□□□□ -1.56
RNU1-88P-201ENST00000459274 EFCAB10A6NFE3 127 aa5.31□□□□□ -1.56
RNU1-88P-201ENST00000459274 CCDC160A6NGH7 325 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms