RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 EFCAB1Q9HAE3 211 aa9.05□□□□□ -0.96
RFX3-210ENST00000457373 KCNJ16Q9NPI9 418 aa9.05□□□□□ -0.96
RFX3-210ENST00000457373 USP22Q9UPT9 525 aa9.05□□□□□ -0.96
RFX3-210ENST00000457373 KLF2Q9Y5W3 355 aaPredicted RBP9.05□□□□□ -0.96
RFX3-210ENST00000457373 TMED7-TICAM2A0A0A6YYA0 188 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 PRORSD1PA6NEY8 169 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 CCT8L1PA6NM43 557 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 ETV2O00321 342 aaPredicted RBP9.04□□□□□ -0.96
RFX3-210ENST00000457373 DVL2O14641 736 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 GCM2O75603 506 aaPredicted RBP9.04□□□□□ -0.96
RFX3-210ENST00000457373 MFN2O95140 757 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 TACR3P29371 465 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 SLC7A1P30825 629 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 PRKAR1BP31321 381 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 ACAA2P42765 397 aaKnown RBP9.04□□□□□ -0.96
RFX3-210ENST00000457373 CPA2P48052 419 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 NUDT2P50583 147 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 COPZ1P61923 177 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 SIRPAP78324 504 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 PRR20EP86478 221 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 PRR20CP86479 221 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 PRR20DP86480 221 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 PRR20BP86481 221 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 PRR20AP86496 221 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 HOXC5Q00444 222 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 DMTNQ08495 405 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 C3orf33Q6P1S2 294 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 DHRS4L2Q6PKH6 230 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 CALHM3Q86XJ0 350 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 ADGRG3Q86Y34 549 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 ARMC8Q8IUR7 673 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 SLC30A8Q8IWU4 369 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 SMYD1Q8NB12 490 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 RELL2Q8NC24 303 aaPredicted RBP9.04□□□□□ -0.96
RFX3-210ENST00000457373 FNDC9Q8TBE3 224 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 CMTM5Q96DZ9 223 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 ZNF583Q96ND8 569 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 OR5B2Q96R09 309 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 PAQR5Q9NXK6 330 aaPredicted RBP9.04□□□□□ -0.96
RFX3-210ENST00000457373 ZNF629Q9UEG4 869 aaPredicted RBP9.04□□□□□ -0.96
RFX3-210ENST00000457373 OSGIN1Q9UJX0 560 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 SLC13A4Q9UKG4 626 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 ADAM21Q9UKJ8 722 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 MCTS1Q9ULC4 181 aaKnown RBP9.04□□□□□ -0.96
RFX3-210ENST00000457373 CLEC4AQ9UMR7 237 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 TMED7Q9Y3B3 224 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 SPIN1Q9Y657 262 aaPredicted RBP9.04□□□□□ -0.96
RFX3-210ENST00000457373 ICE1Q9Y2F5 2266 aa9.04□□□□□ -0.96
RFX3-210ENST00000457373 BAHCC1Q9P281 2608 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 IGHV3-15A0A0B4J1V0 119 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 TMEM72A0PK05 275 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 FAAHO00519 579 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 ADAMDEC1O15204 470 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 FBXO24O75426 580 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 DCTN3O75935 186 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 AQP8O94778 261 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 CXCR1P25024 350 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 PRDX6P30041 224 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 PCGF2P35227 344 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 OPRM1P35372 400 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 SLC1A3P43003 542 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 HTR3AP46098 478 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 POLR2HP52434 150 aaKnown RBP9.03□□□□□ -0.96
RFX3-210ENST00000457373 DLX5P56178 289 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 PCBP3P57721 371 aaKnown RBP9.03□□□□□ -0.96
RFX3-210ENST00000457373 SLC25A35Q3KQZ1 300 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 SYT14P1Q58G82 188 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 INTS11Q5TA45 600 aaKnown RBP9.03□□□□□ -0.96
RFX3-210ENST00000457373 GKAP1Q5VSY0 366 aaPredicted RBP9.03□□□□□ -0.96
RFX3-210ENST00000457373 ZNF787Q6DD87 383 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 WBP2NLQ6ICG8 309 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 OR2A2Q6IF42 318 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 ERICH5Q6P6B1 374 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 VWA1Q6PCB0 445 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 PATL1Q86TB9 770 aaKnown RBP9.03□□□□□ -0.96
RFX3-210ENST00000457373 COMTD1Q86VU5 262 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 MCEMP1Q8IX19 187 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 SLC15A3Q8IY34 581 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 CNEP1R1Q8N9A8 125 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 REXO5Q96IC2 774 aaKnown RBP9.03□□□□□ -0.96
RFX3-210ENST00000457373 ZFP3Q96NJ6 502 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 LRRC37BQ96QE4 947 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 HOPXQ9BPY8 73 aaPredicted RBP9.03□□□□□ -0.96
RFX3-210ENST00000457373 GPATCH1Q9BRR8 931 aaKnown RBP9.03□□□□□ -0.96
RFX3-210ENST00000457373 SRXN1Q9BYN0 137 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 OR11A1Q9GZK7 315 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 ADAM19Q9H013 955 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 COQ10BQ9H8M1 238 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 LIN7BQ9HAP6 207 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 CHST11Q9NPF2 352 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 TIGARQ9NQ88 270 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 CMTM6Q9NX76 183 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 KLHL28Q9NXS3 571 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 GMPR2Q9P2T1 348 aaKnown RBP9.03□□□□□ -0.96
RFX3-210ENST00000457373 RPS6KB2Q9UBS0 482 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 CHRNA9Q9UGM1 479 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 ZNF175Q9Y473 711 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 RELNP78509 3460 aa9.03□□□□□ -0.96
RFX3-210ENST00000457373 INTS1Q8N201 2190 aaKnown RBP9.02□□□□□ -0.97
RFX3-210ENST00000457373 A0A1W2PNV4 684 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms