RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 E9PLN8 166 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 H0Y3Z8 333 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 DNPH1O43598 174 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 CIB2O75838 187 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 IL11P20809 199 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 ACVR2AP27037 513 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 SLC7A1P30825 629 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 OR1E2P47887 323 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 TAS2R41P59536 307 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 MRPL49Q13405 166 aaKnown RBP12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 ZSCAN26Q16670 478 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 ELOA3BQ3SY89 546 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 TMEM176BQ3YBM2 270 aaPredicted RBP12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 EMC4Q5J8M3 183 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 DEF8Q6ZN54 512 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 PIWIL3Q7Z3Z3 882 aaKnown RBP12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 ADGRE4PQ86SQ3 457 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 CD163Q86VB7 1156 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 ELOA3Q8NG57 546 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 OR10Q1Q8NGQ4 319 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 OR2V1Q8NHB1 315 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 C7orf34Q96L11 122 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 VKORC1Q9BQB6 163 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 SLC19A3Q9BZV2 496 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 AMBRA1Q9C0C7 1298 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 CALHM2Q9HA72 323 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 IL1RAPQ9NPH3 570 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 PNPLA3Q9NST1 481 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 CAMK2AQ9UQM7 478 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 OSGIN2Q9Y236 505 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 TRAPPC4Q9Y296 219 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 FAM32AQ9Y421 112 aaKnown RBP12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 ZNF175Q9Y473 711 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 ENPP4Q9Y6X5 453 aa12.88□□□□□ -0.35
HMGXB4-204ENST00000455359 ZNF407Q9C0G0 2248 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 SHANK1Q9Y566 2161 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 SPENQ96T58 3664 aaKnown RBP12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 TRGV8A0A0C4DH27 118 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 CD8B2A6NJW9 211 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 CPSF4LA6NMK7 179 aaKnown RBP12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 EIF1AYO14602 144 aaKnown RBP12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 OR2T1O43869 369 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 NPIPB7O75200 414 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 WISP1O95388 367 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 GPIP06744 558 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 RHCEP18577 417 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 TNFRSF1BP20333 461 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 GNLYP22749 145 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 CDH12P55289 794 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 CLDN15P56746 228 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 CLDN20P56880 219 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 SMIM11AP58511 58 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 CSNK2A1P68400 391 aaPredicted RBP12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 ST3GAL3Q11203 375 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 C3AR1Q16581 482 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 CTU2Q2VPK5 515 aaKnown RBP12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 ACSF3Q4G176 576 aaPredicted RBP12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 FAM98BQ52LJ0 330 aaKnown RBP12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 TMEM211Q6ICI0 200 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 ZNF585AQ6P3V2 769 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 LINC00114Q6XXX2 140 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 TMPPEQ6ZT21 453 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 OFCC1Q8IZS5 231 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 OR6S1Q8NH40 331 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 SLC41A3Q96GZ6 507 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 RAB3IPQ96QF0 476 aaPredicted RBP12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 ZNF300Q96RE9 604 aaPredicted RBP12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 ZNF347Q96SE7 839 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 EPYCQ99645 322 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 TMEM43Q9BTV4 400 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 PRR14Q9BWN1 585 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 ANKRD19PQ9H560 264 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 NDUFAF4Q9P032 175 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 TNFRSF10DQ9UBN6 386 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 RIMS3Q9UJD0 308 aa12.87□□□□□ -0.35
HMGXB4-204ENST00000455359 DNAJC13O75165 2243 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 A0A0J9YW62 118 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 TMEM72A0PK05 275 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 J3QKU1 62 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 SEC14L5O43304 696 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 SEMA7AO75326 666 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 LYPD3O95274 346 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 PMS2P2O95744 297 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 IGF2P01344 180 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 FABP3P05413 133 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 FCGR2AP12318 317 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 PLA2G2AP14555 144 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 RBM34P42696 430 aaKnown RBP12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 MAGEA2P43356 314 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 SUCLG1P53597 346 aaKnown RBP12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 CARD18P57730 90 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 RAC3P60763 192 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 SRYQ05066 204 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 CHRNB3Q05901 458 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 PIN1Q13526 163 aaPredicted RBP12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 MFSD13AQ14CX5 517 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 C4orf17Q53FE4 359 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 C1orf185Q5T7R7 199 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 NSUN5P2Q63ZY6 315 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 HBMQ6B0K9 141 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms