RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 C1GALT1C1Q96EU7 318 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 CERS2Q96G23 380 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 VSTM2LQ96N03 204 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 ZNF681Q96N22 645 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 FOXN4Q96NZ1 517 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 MTERF1Q99551 399 aaKnown RBP3.22□□□□□ -1.89
RBM39-220ENST00000455343 CENPKQ9BS16 269 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 NAT9Q9BTE0 207 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 QTRT1Q9BXR0 403 aaKnown RBP3.22□□□□□ -1.89
RBM39-220ENST00000455343 POTEKPQ9BYX7 375 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 DERL2Q9GZP9 239 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 STMN4Q9H169 189 aaPredicted RBP3.22□□□□□ -1.89
RBM39-220ENST00000455343 MRPL46Q9H2W6 279 aaKnown RBP3.22□□□□□ -1.89
RBM39-220ENST00000455343 DSN1Q9H410 356 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 WDR41Q9HAD4 459 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 FOLH1BQ9HBA9 442 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 POPDC3Q9HBV1 291 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 SMYD2Q9NRG4 433 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 NPAP1Q9NZP6 1156 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 MED11Q9P086 117 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 CTNNAL1Q9UBT7 734 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 PRODH2Q9UF12 536 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.22□□□□□ -1.89
RBM39-220ENST00000455343 NINQ8N4C6 2090 aa3.22□□□□□ -1.89
RBM39-220ENST00000455343 PRR14LQ5THK1 2151 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 A0A0J9YW62 118 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 LOC390937A0A1W2PQ73 354 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 C1orf226A1L170 272 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 FOXE1O00358 373 aaPredicted RBP3.21□□□□□ -1.9
RBM39-220ENST00000455343 SLC16A6O15403 523 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 CXCL13O43927 109 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 UGDHO60701 494 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 IPO7O95373 1038 aaKnown RBP3.21□□□□□ -1.9
RBM39-220ENST00000455343 NTN1O95631 604 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 PLGP00747 810 aaPredicted RBP3.21□□□□□ -1.9
RBM39-220ENST00000455343 ADAP00813 363 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 KRT14P02533 472 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 FGGP02679 453 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 GBAP04062 536 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 TACSTD2P09758 323 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 CCDC166P0CW27 439 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 PCNAP12004 261 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 CD1DP15813 335 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 ZNF17P17021 662 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 CSNK2A2P19784 350 aaPredicted RBP3.21□□□□□ -1.9
RBM39-220ENST00000455343 COX5AP20674 150 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 IL32P24001 234 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 EDNRAP25101 427 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 PTAFRP25105 342 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 EVI2BP34910 448 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 LIPAP38571 399 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 PDLIM4P50479 330 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 RAP1GDS1P52306 607 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 TERF1P54274 439 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 GPX6P59796 221 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 PSG6Q00889 435 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 FRG1Q14331 258 aaKnown RBP3.21□□□□□ -1.9
RBM39-220ENST00000455343 GGTLC2Q14390 218 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 SLMAPQ14BN4 828 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 PPA1Q15181 289 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 OR4D1Q15615 310 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 ZNF628Q5EBL2 1059 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 SPANXN3Q5MJ09 141 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 RNASEH2BQ5TBB1 312 aaKnown RBP3.21□□□□□ -1.9
RBM39-220ENST00000455343 LIPJQ5W064 366 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 SFRP4Q6FHJ7 346 aaPredicted RBP3.21□□□□□ -1.9
RBM39-220ENST00000455343 SLC48A1Q6P1K1 146 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 CYP20A1Q6UW02 462 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 TMEM108Q6UXF1 575 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 Q6ZT83 130 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 FRA10AC1Q70Z53 315 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 NUFIP2Q7Z417 695 aaKnown RBP3.21□□□□□ -1.9
RBM39-220ENST00000455343 P2RY8Q86VZ1 359 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 CCDC25Q86WR0 208 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 NUDT13Q86X67 352 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 MED12LQ86YW9 2145 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 TMEM139Q8IV31 216 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 WDR75Q8IWA0 830 aaKnown RBP3.21□□□□□ -1.9
RBM39-220ENST00000455343 TUSC5Q8IXB3 177 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 ZNF619Q8N2I2 560 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 MIER2Q8N344 545 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 GTPBP8Q8N3Z3 284 aaPredicted RBP3.21□□□□□ -1.9
RBM39-220ENST00000455343 SNX31Q8N9S9 440 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 OR4N2Q8NGD1 307 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 ZNF675Q8TD23 568 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 TRPC4APQ8TEL6 797 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 DUSP19Q8WTR2 217 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 MAIP1Q8WWC4 291 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 NXNL1Q96CM4 212 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 ERP27Q96DN0 273 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 CNRIP1Q96F85 164 aaPredicted RBP3.21□□□□□ -1.9
RBM39-220ENST00000455343 UBXN10Q96LJ8 280 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 NPAS1Q99742 590 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 INPP5KQ9BT40 448 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 PRRG4Q9BZD6 226 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 BRINP2Q9C0B6 783 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 BPESC1Q9GZL8 116 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 PTGES2Q9H7Z7 377 aa3.21□□□□□ -1.9
RBM39-220ENST00000455343 MYOZ1Q9NP98 299 aaPredicted RBP3.21□□□□□ -1.9
RBM39-220ENST00000455343 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms