RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 MT-ND4P03905 459 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 DNASE1P24855 282 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 NTRK2Q16620 822 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 NDUFA9Q16795 377 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 TMEM35AQ53FP2 167 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 ACSM3Q53FZ2 586 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 SLC51BQ86UW2 128 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 HYLS1Q96M11 299 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 HS6ST2Q96MM7 605 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 PITX2Q99697 317 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 BTBD2Q9BX70 525 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 ENKD1Q9H0I2 346 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 SLC38A1Q9H2H9 487 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 FTSJ1Q9UET6 329 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 HEATR5BQ9P2D3 2071 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 TEX51A0A1B0GUA7 166 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 RHPN2P1A8MT19 583 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 P2RX6O15547 441 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 ACP2P11117 423 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 MAKP20794 623 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 HTR3AP46098 478 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 OMPP47874 163 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 CCR6P51684 374 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 GBX2P52951 348 aaPredicted RBP10.36□□□□□ -0.75
DDR1-240ENST00000454612 ADAM15Q13444 863 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 LRRC37A5PQ49AS3 106 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 FAAP20Q6NZ36 180 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 ZNF765Q7L2R6 523 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 TMED4Q7Z7H5 227 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 PLCZ1Q86YW0 608 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 PLPP6Q8IY26 295 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 RDH10Q8IZV5 341 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 NANOGP1Q8N7R0 232 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 TOE1Q96GM8 510 aaKnown RBP10.36□□□□□ -0.75
DDR1-240ENST00000454612 LMF1Q96S06 567 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 FUZQ9BT04 418 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 KATNB1Q9BVA0 655 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 PINK1Q9BXM7 581 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 BARHL1Q9BZE3 327 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 ULBP3Q9BZM4 244 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 PRTFDC1Q9NRG1 225 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 CNOT2Q9NZN8 540 aaKnown RBP10.36□□□□□ -0.75
DDR1-240ENST00000454612 CPNE7Q9UBL6 633 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 LIPT1Q9Y234 373 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 EXOSC1Q9Y3B2 195 aaKnown RBP10.36□□□□□ -0.75
DDR1-240ENST00000454612 KLK4Q9Y5K2 254 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 C4orf51C9J302 202 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 F3P13726 295 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 GIFP27352 417 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 GNALP38405 381 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 ADPRHP54922 357 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 TSPAN5P62079 268 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 HAGHLQ6PII5 290 aaPredicted RBP10.36□□□□□ -0.75
DDR1-240ENST00000454612 SLC35D2Q76EJ3 337 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 VWA5B2Q8N398 1253 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 CEP76Q8TAP6 659 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 GABARAPL1Q9H0R8 117 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 Q9N2J8 555 aa10.36□□□□□ -0.75
DDR1-240ENST00000454612 TRAV20A0A0B4J274 112 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 ANXA2P2A6NMY6 339 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 ANXA2P07355 339 aaKnown RBP10.35□□□□□ -0.75
DDR1-240ENST00000454612 RAB3BP20337 219 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 E2F1Q01094 437 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 EIPR1Q53HC9 387 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 LEG1Q6P5S2 330 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 ZNF836Q6ZNA1 936 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 OR4C15Q8NGM1 316 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 OR4Q3Q8NH05 313 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 DNAJA4Q8WW22 397 aaPredicted RBP10.35□□□□□ -0.75
DDR1-240ENST00000454612 GHSRQ92847 366 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 JSRP1Q96MG2 331 aaPredicted RBP10.35□□□□□ -0.75
DDR1-240ENST00000454612 CACNG6Q9BXT2 260 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 B3GNT4Q9C0J1 378 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 SLITRK2Q9H156 845 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 ZMAT3Q9HA38 289 aaKnown RBP10.35□□□□□ -0.75
DDR1-240ENST00000454612 ACSS1Q9NUB1 689 aaPredicted RBP10.35□□□□□ -0.75
DDR1-240ENST00000454612 POLEQ07864 2286 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 ZNF670-ZNF695F2Z2N8 137 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 L7N2F9 121 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 XKRYO14609 159 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 GMDSO60547 372 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 SEMA7AO75326 666 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 SEMA4FO95754 770 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 TSPAN31Q12999 210 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 MLLT11Q13015 90 aaPredicted RBP10.35□□□□□ -0.75
DDR1-240ENST00000454612 ELOAQ14241 798 aaKnown RBP10.35□□□□□ -0.75
DDR1-240ENST00000454612 MFSD12Q6NUT3 480 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 ZNF627Q7L945 461 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 ZNF566Q969W8 418 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 RFT1Q96AA3 541 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 RASD2Q96D21 266 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 MS4A4EQ96PG1 132 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 HCAR1Q9BXC0 346 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 PRDM7Q9NQW5 492 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 HEBP2Q9Y5Z4 205 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 IDSB3KWA1 339 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 PRPH2P23942 346 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 ARHGDIBP52566 201 aa10.35□□□□□ -0.75
DDR1-240ENST00000454612 RPS15AP62244 130 aaKnown RBP10.35□□□□□ -0.75
DDR1-240ENST00000454612 SMCO1Q147U7 214 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms