RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 C1orf105O95561 183 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 TROVE2P10155 538 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 COX5AP20674 150 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 NMT1P30419 496 aaKnown RBP3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 FGF9P31371 208 aaPredicted RBP3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 IL2RGP31785 369 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 RDXP35241 583 aaKnown RBP3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 CCT6AP40227 531 aaKnown RBP3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 LEPP41159 167 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 RPS5P46782 204 aaKnown RBP3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 SLC8A3P57103 927 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 PAX8Q06710 450 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 ILKQ13418 452 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 IL18Q14116 193 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 MICAQ29983 383 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 FAM182AQ5T1J6 154 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 MEDAGQ5VYS4 303 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 SASS6Q6UVJ0 657 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 Q6ZSR3 168 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 NIPA1Q7RTP0 329 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 Q8N377 158 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 SVOPLQ8N434 492 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 ZNF321PQ8N8H1 164 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 BEST4Q8NFU0 473 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 OR56B4Q8NH76 319 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 ZPLD1Q8TCW7 415 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 TSEN15Q8WW01 171 aaKnown RBP3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 PPP1R16AQ96I34 528 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 NOL4LQ96MY1 436 aaPredicted RBP3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 DUX3Q96PT4 197 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 TGS1Q96RS0 853 aaKnown RBP3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 RNF126Q9BV68 326 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 RAB34Q9BZG1 259 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 SMYD3Q9H7B4 428 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 ZNF160Q9HCG1 818 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 INPP5EQ9NRR6 644 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 CUTCQ9NTM9 273 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 IMPAD1Q9NX62 359 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 HOXC10Q9NYD6 342 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 PTTG3PQ9NZH4 202 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 PDP1Q9P0J1 537 aaPredicted RBP3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 GCNT4Q9P109 453 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 MUTYHQ9UIF7 546 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 STARD10Q9Y365 291 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 STYXL1Q9Y6J8 313 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 CNTNAP2Q9UHC6 1331 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 IDSB3KWA1 339 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 EDIL3O43854 480 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 ZG16O60844 167 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 ZNF253O75346 499 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 GJB5O95377 273 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 FTH1P02794 183 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 MMP1P03956 469 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 HOXD4P09016 255 aaPredicted RBP3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 POLR2MP0CAP2 368 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 MCF2P10911 925 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 BCL3P20749 454 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 CHMLP26374 656 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 ATP5C1P36542 298 aaKnown RBP3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 SLC11A1P49279 550 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 HNRNPA3P51991 378 aaKnown RBP3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 C21orf59P57076 290 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 LMO4P61968 165 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 PAX2Q02962 417 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 ELAVL2Q12926 359 aaKnown RBP3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 MAB21L1Q13394 359 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 PPP1R7Q15435 360 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 LY6G6FQ5SQ64 297 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 RUSC1-AS1Q66K80 236 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 ASCL5Q7RTU5 278 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 LUZP2Q86TE4 346 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 ERICH1Q86X53 443 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 KATNAL2Q8IYT4 538 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 FBXL16Q8N461 479 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 OR7G2Q8NG99 324 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 OR4C5Q8NGB2 326 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 OR52K1Q8NGK4 314 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 NRGNQ92686 78 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 PSMG2Q969U7 264 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 MCUR1Q96AQ8 359 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 HAVCR1Q96D42 359 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 NUS1Q96E22 293 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 PLEKHA8Q96JA3 519 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 C18orf12Q96KH6 178 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 OPRPNQ99935 248 aaPredicted RBP3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 MAPKAP1Q9BPZ7 522 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 DPH7Q9BTV6 452 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 LRRC61Q9BV99 259 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 FAIM2Q9BWQ8 316 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 AUNIPQ9H7T9 357 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 IKZF2Q9UKS7 526 aa3.27□□□□□ -1.89
HMGN3P1-201ENST00000453847 MROH5Q6ZUA9 1318 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 CLSPNQ9HAW4 1339 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 TCF20Q9UGU0 1960 aaKnown RBP3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 IGKV1D-8A0A087WSZ0 117 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 TRAV9-2A0A087WT02 112 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 C9JVG2 144 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 E9PAM4 449 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 TEX46H3BTG2 121 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms