RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CCDC103Q8IW40 242 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 UBE2J2Q8N2K1 259 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 SLC43A2Q8N370 569 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 SLC25A43Q8WUT9 341 aaPredicted RBP8.6□□□□□ -1.03
USP54-207ENST00000451492 GTF2H4Q92759 462 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 DDIT4LQ96D03 193 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 SPDL1Q96EA4 605 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 ZHX1-C8orf76Q96EF9 292 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 PLPPR2Q96GM1 343 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 ALPK1Q96QP1 1244 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 CCL19Q99731 98 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 TACO1Q9BSH4 297 aaKnown RBP8.6□□□□□ -1.03
USP54-207ENST00000451492 NPHS2Q9NP85 383 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 EXOSC3Q9NQT5 275 aaKnown RBP8.6□□□□□ -1.03
USP54-207ENST00000451492 ING1Q9UK53 422 aaPredicted RBP8.6□□□□□ -1.03
USP54-207ENST00000451492 TMED7Q9Y3B3 224 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 PRRC2AP48634 2157 aaKnown RBP8.6□□□□□ -1.03
USP54-207ENST00000451492 ZC3H12DA2A288 527 aaKnown RBP8.59□□□□□ -1.03
USP54-207ENST00000451492 CFAP73A6NFT4 308 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 ZNF814B7Z6K7 855 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 C5orf58C9J3I9 102 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 CLIC1O00299 241 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 CLOCKO15516 846 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 DNAJA2O60884 412 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 RAMP1O60894 148 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 GCM2O75603 506 aaPredicted RBP8.59□□□□□ -1.03
USP54-207ENST00000451492 SASH3O75995 380 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 GUSBP08236 651 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 ZCCHC18P0CG32 403 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 PRG2P13727 222 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 CD99P14209 185 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 POLR2HP52434 150 aaKnown RBP8.59□□□□□ -1.03
USP54-207ENST00000451492 TXNL4AP83876 142 aaKnown RBP8.59□□□□□ -1.03
USP54-207ENST00000451492 HOXC5Q00444 222 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 FOXD4Q12950 439 aaPredicted RBP8.59□□□□□ -1.03
USP54-207ENST00000451492 RGNQ15493 299 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 BEX5Q5H9J7 111 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 PAGE3Q5JUK9 113 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 ABLIM2Q6H8Q1 611 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 CASP12Q6UXS9 341 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 TMPPEQ6ZT21 453 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 MSANTD1Q6ZTZ1 278 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 BHLHA15Q7RTS1 189 aaPredicted RBP8.59□□□□□ -1.03
USP54-207ENST00000451492 ATG4DQ86TL0 474 aaPredicted RBP8.59□□□□□ -1.03
USP54-207ENST00000451492 ADGRG3Q86Y34 549 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 TGIF2LYQ8IUE0 185 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 FUNDC1Q8IVP5 155 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 CMIPQ8IY22 773 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 ZNF100Q8IYN0 542 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 WFDC11Q8NEX6 87 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 NFKBIDQ8NI38 313 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 SLC38A5Q8WUX1 472 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 KISS1RQ969F8 398 aaPredicted RBP8.59□□□□□ -1.03
USP54-207ENST00000451492 PERPQ96FX8 193 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 CCDC28BQ9BUN5 200 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 MTHFD2LQ9H903 347 aaPredicted RBP8.59□□□□□ -1.03
USP54-207ENST00000451492 CALML5Q9NZT1 146 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 SLAMF8Q9P0V8 285 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.59□□□□□ -1.03
USP54-207ENST00000451492 DCTN4Q9UJW0 460 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 OSGIN1Q9UJX0 560 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 NOSIPQ9Y314 301 aaKnown RBP8.59□□□□□ -1.03
USP54-207ENST00000451492 SPG11Q96JI7 2443 aa8.59□□□□□ -1.03
USP54-207ENST00000451492 DSPPQ9NZW4 1301 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 A0A096LPI6 279 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 CDHR4A6H8M9 788 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 RAD51DO75771 328 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 TGDSO95455 350 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 PMS2P2O95744 297 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 TFPTP0C1Z6 253 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 IMPDH2P12268 514 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 H2AFXP16104 143 aaPredicted RBP8.58□□□□□ -1.04
USP54-207ENST00000451492 PPP3CBP16298 524 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 PSMB1P20618 241 aaKnown RBP8.58□□□□□ -1.04
USP54-207ENST00000451492 PTNP21246 168 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 CXCR1P25024 350 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 LOXP28300 417 aaPredicted RBP8.58□□□□□ -1.04
USP54-207ENST00000451492 ADSLP30566 484 aaPredicted RBP8.58□□□□□ -1.04
USP54-207ENST00000451492 HTR3AP46098 478 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 OR3A2P47893 321 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 SQLEQ14534 574 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 LARS2Q15031 903 aaKnown RBP8.58□□□□□ -1.04
USP54-207ENST00000451492 OR7A5Q15622 319 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 ZNF311Q5JNZ3 666 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 SFRP5Q5T4F7 317 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 C9orf135Q5VTT2 229 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 ZNF704Q6ZNC4 412 aaPredicted RBP8.58□□□□□ -1.04
USP54-207ENST00000451492 GALNT5Q7Z7M9 940 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 SERPINA11Q86U17 422 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 MSRB3Q8IXL7 192 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 GABRG1Q8N1C3 465 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 C10orf111Q8N326 155 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 CLIP4Q8N3C7 705 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 STEAP2Q8NFT2 490 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 PIGXQ8TBF5 258 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 CKAP2Q8WWK9 683 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 OIT3Q8WWZ8 545 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 MAGEB18Q96M61 343 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 CXXC4Q9H2H0 198 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 RAD21L1Q9H4I0 556 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms