RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TSC22D1Q15714 1073 aa13.56□□□□□ -0.24
CHD3-205ENST00000449744 EPGNQ6UW88 154 aa13.56□□□□□ -0.24
CHD3-205ENST00000449744 ZNF704Q6ZNC4 412 aaPredicted RBP13.56□□□□□ -0.24
CHD3-205ENST00000449744 GALNT5Q7Z7M9 940 aa13.56□□□□□ -0.24
CHD3-205ENST00000449744 ADGRG3Q86Y34 549 aa13.56□□□□□ -0.24
CHD3-205ENST00000449744 ZNF440Q8IYI8 595 aa13.56□□□□□ -0.24
CHD3-205ENST00000449744 WFDC11Q8NEX6 87 aa13.56□□□□□ -0.24
CHD3-205ENST00000449744 OR9I1Q8NGQ6 314 aa13.56□□□□□ -0.24
CHD3-205ENST00000449744 DYDC1Q8WWB3 177 aa13.56□□□□□ -0.24
CHD3-205ENST00000449744 VPS33AQ96AX1 596 aa13.56□□□□□ -0.24
CHD3-205ENST00000449744 DNAJA3Q96EY1 480 aa13.56□□□□□ -0.24
CHD3-205ENST00000449744 C7orf26Q96N11 449 aa13.56□□□□□ -0.24
CHD3-205ENST00000449744 USB1Q9BQ65 265 aaKnown RBP13.56□□□□□ -0.24
CHD3-205ENST00000449744 TPT1P8Q9HAU6 139 aa13.56□□□□□ -0.24
CHD3-205ENST00000449744 PRSS50Q9UI38 385 aa13.56□□□□□ -0.24
CHD3-205ENST00000449744 ING1Q9UK53 422 aaPredicted RBP13.56□□□□□ -0.24
CHD3-205ENST00000449744 HRNRQ86YZ3 2850 aaPredicted RBP13.56□□□□□ -0.24
CHD3-205ENST00000449744 ITPR3Q14573 2671 aa13.56□□□□□ -0.24
CHD3-205ENST00000449744 TMED7-TICAM2A0A0A6YYA0 188 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 FAM234BA2RU67 622 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 CFAP73A6NFT4 308 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 ZNF814B7Z6K7 855 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 DNPH1O43598 174 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 PMS2P2O95744 297 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 BCHEP06276 602 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 FOSL1P15407 271 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 RPS4Y1P22090 263 aaKnown RBP13.55□□□□□ -0.24
CHD3-205ENST00000449744 HOXC12P31275 282 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 OR2B6P58173 313 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 PLAURQ03405 335 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 CAPRIN1Q14444 709 aaKnown RBP13.55□□□□□ -0.24
CHD3-205ENST00000449744 PDK3Q15120 406 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 GTDC1Q4AE62 458 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 LIN52Q52LA3 116 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 MRPL2Q5T653 305 aaKnown RBP13.55□□□□□ -0.24
CHD3-205ENST00000449744 Q6ZT83 130 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 BHLHA15Q7RTS1 189 aaPredicted RBP13.55□□□□□ -0.24
CHD3-205ENST00000449744 LRRC75A-AS1Q8N1F1 130 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 GOLGA6L1Q8N7Z2 621 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 OR52P1PQ8NH57 321 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 PIGXQ8TBF5 258 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 HSD17B8Q92506 261 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 DDIT4LQ96D03 193 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 ARL5BQ96KC2 179 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 ATP6V1G3Q96LB4 118 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 POTEKPQ9BYX7 375 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 OR11A1Q9GZK7 315 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 TCF7L2Q9NQB0 619 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 SLC6A13Q9NSD5 602 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 THUMPD1Q9NXG2 353 aaKnown RBP13.55□□□□□ -0.24
CHD3-205ENST00000449744 TMED7Q9Y3B3 224 aa13.55□□□□□ -0.24
CHD3-205ENST00000449744 NAV3Q8IVL0 2385 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 FAAHO00519 579 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 GPR171O14626 319 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 ADAM11O75078 769 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 TGDSO95455 350 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 TACR3P29371 465 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 SLC1A3P43003 542 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 MVDP53602 400 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 EPS8Q12929 822 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 TAB1Q15750 504 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 ABLIM2Q6H8Q1 611 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.54□□□□□ -0.24
CHD3-205ENST00000449744 VRK2Q86Y07 508 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 AURKBQ96GD4 344 aaPredicted RBP13.54□□□□□ -0.24
CHD3-205ENST00000449744 RAD21L1Q9H4I0 556 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 ARMC7Q9H6L4 198 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 ESRP2Q9H6T0 727 aaKnown RBP13.54□□□□□ -0.24
CHD3-205ENST00000449744 TMEM181Q9P2C4 612 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 OSGIN1Q9UJX0 560 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 ZNF232Q9UNY5 417 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 NOSIPQ9Y314 301 aaKnown RBP13.54□□□□□ -0.24
CHD3-205ENST00000449744 ZFHX3Q15911 3703 aa13.54□□□□□ -0.24
CHD3-205ENST00000449744 IGKV3D-15A0A087WSY6 115 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 TMEM72A0PK05 275 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 ZNF208O43345 1280 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 LYZL6O75951 148 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 CNOT4O95628 575 aaKnown RBP13.53□□□□□ -0.24
CHD3-205ENST00000449744 PLAUP00749 431 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 TFPTP0C1Z6 253 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 MAP2K6P52564 334 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 COPZ1P61923 177 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 SLC35A1P78382 337 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 LARS2Q15031 903 aaKnown RBP13.53□□□□□ -0.24
CHD3-205ENST00000449744 STK11Q15831 433 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 ZSWIM7Q19AV6 140 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 KRTAP21-3Q3LHN1 58 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 Q5PR19 223 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 SLC2A7Q6PXP3 512 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 ZNF836Q6ZNA1 936 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 UBE2J2Q8N2K1 259 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 SLC38A5Q8WUX1 472 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 TMEM171Q8WVE6 324 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 GTF2H4Q92759 462 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 APH1AQ96BI3 265 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 TMEM19Q96HH6 336 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 NAA11Q9BSU3 229 aaPredicted RBP13.53□□□□□ -0.24
CHD3-205ENST00000449744 SLCO1B3Q9NPD5 702 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 RLIMQ9NVW2 624 aa13.53□□□□□ -0.24
CHD3-205ENST00000449744 TRAPPC4Q9Y296 219 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms