RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 FBXO46Q6PJ61 603 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 IL20RBQ6UXL0 311 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CYHR1Q6ZMK1 362 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 COLCA1Q6ZS62 124 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 MON1BQ7L1V2 547 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 TCF24Q7RTU0 167 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 SMIM15Q7Z3B0 74 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 RANBP3LQ86VV4 465 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 RFX6Q8HWS3 928 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CBLN2Q8IUK8 224 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 SERPINA12Q8IW75 414 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CNTN4Q8IWV2 1026 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPR65Q8IYL9 337 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CDK20Q8IZL9 346 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 MMP21Q8N119 569 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 STK40Q8N2I9 435 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 LCORLQ8N3X6 602 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 FAM71CQ8NEG0 241 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 PXT1Q8NFP0 134 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR2M7Q8NG81 312 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 MBD3L2Q8NHZ7 208 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 SUN3Q8TAQ9 357 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 RNASE8Q8TDE3 154 aaKnown RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 RNASEH2CQ8TDP1 164 aaKnown RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 NEK7Q8TDX7 302 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 WFIKKN2Q8TEU8 576 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 C2CD4CQ8TF44 421 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 KCNE4Q8WWG9 221 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 ULK4Q96C45 1275 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 FAM120BQ96EK7 910 aaKnown RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 RNF125Q96EQ8 232 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 SCRN2Q96FV2 425 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 TAAR6Q96RI8 345 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 FIZ1Q96SL8 496 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CNN2Q99439 309 aaKnown RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 MTERF1Q99551 399 aaKnown RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 ACBD6Q9BR61 282 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 C7orf50Q9BRJ6 194 aaKnown RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 NUDT16L1Q9BRJ7 211 aaKnown RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 UTP23Q9BRU9 249 aaKnown RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF426Q9BUY5 554 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 BBS2Q9BXC9 721 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 SNHG12Q9BXW3 62 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 GABARAPL3Q9BY60 117 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 PCED1AQ9H1Q7 454 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR51E2Q9H255 320 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR52A5Q9H2C5 316 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC38A1Q9H2H9 487 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR51J1Q9H342 316 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 WDR55Q9H6Y2 383 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CXorf36Q9H7Y0 433 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 PTGES2Q9H7Z7 377 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 GBA2Q9HCG7 927 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 MSL2Q9HCI7 577 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 B3GAT2Q9NPZ5 323 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 TREX1Q9NSU2 369 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 MIOSQ9NXC5 875 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 VNN3Q9NY84 501 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CALML5Q9NZT1 146 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 PLEKHB1Q9UF11 243 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR52A1Q9UKL2 312 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 NDRG2Q9UN36 371 aaKnown RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 NIP7Q9Y221 180 aaKnown RBP eCLIP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 POFUT2Q9Y2G5 429 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC27A6Q9Y2P4 619 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 COQ4Q9Y3A0 265 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CLDN16Q9Y5I7 305 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 LY75O60449 1722 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 WDR90Q96KV7 1748 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 GBF1Q92538 1859 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 MICAL3Q7RTP6 2002 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 FAM240BA0A1B0GVZ2 78 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 TCRBV21S2A2A0A5A6 115 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 HYKKA2RU49 373 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 RNF222A6NCQ9 220 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 CXorf65A6NEN9 183 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 ZNF724A8MTY0 619 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 CDRT15L2A8MXV6 281 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 SEC14L6B5MCN3 397 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 DISC1C4P0D8 188 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 PRR23D1E9PI22 279 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 NPIPA2E9PIF3 369 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 GTPBP1O00178 669 aaKnown RBP3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 CXCL11O14625 94 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 FFAR3O14843 346 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 SLC37A4O43826 429 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 OR10H2O60403 315 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 PRAF2O60831 178 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 SH3BGRLO75368 114 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 SLCO2B1O94956 709 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 SGPL1O95470 568 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 AP2A1O95782 977 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 FADS2O95864 444 aaKnown RBP3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 NDUFB10O96000 172 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 SERPINA3P01011 423 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 CSF2P04141 144 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 CRYGCP07315 174 aa3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 PRR23D2P0DMB1 279 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P8-201ENST00000449709 C1GALT1C1LP0DN25 315 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms