RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 RPS26P11Q5JNZ5 115 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 RNF220Q5VTB9 566 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 METTL21CQ5VZV1 264 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 ZNF836Q6ZNA1 936 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 MTDHQ86UE4 582 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 RETREG3Q86VR2 466 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 DPP10Q8N608 796 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 SLC25A43Q8WUT9 341 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 OR5B2Q96R09 309 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 PSD2Q9BQI7 771 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 SIKE1Q9BRV8 207 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 RABEP2Q9H5N1 569 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 NPHS2Q9NP85 383 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 KLHL13Q9P2N7 655 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 TRAPPC4Q9Y296 219 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 TMED7-TICAM2A0A0A6YYA0 188 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 IGHV3-15A0A0B4J1V0 119 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 ZNF814B7Z6K7 855 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 NR5A2O00482 541 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 ZNF208O43345 1280 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 GCM2O75603 506 aaPredicted RBP12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 PGM3O95394 542 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 GKN3PP0CG01 181 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 PRG2P13727 222 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 NCF2P19878 526 aaPredicted RBP12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 EDNRAP25101 427 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 TACR3P29371 465 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 SLC7A1P30825 629 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 NTF4P34130 210 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 HTR3AP46098 478 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 MAP2K6P52564 334 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 GNA13Q14344 377 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 PDK3Q15120 406 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 ZSWIM7Q19AV6 140 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 CGB2Q6NT52 195 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 PPP4R4Q6NUP7 873 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 ZNF440Q8IYI8 595 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 GABRG1Q8N1C3 465 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 ZNF563Q8TA94 476 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 TSPEARQ8WU66 669 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 REXO5Q96IC2 774 aaKnown RBP12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 SPATA9Q9BWV2 254 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 OR11A1Q9GZK7 315 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 RAD21L1Q9H4I0 556 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 KLHL28Q9NXS3 571 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 ZNF443Q9Y2A4 671 aaPredicted RBP12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 TMED7Q9Y3B3 224 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 HDGFL3Q9Y3E1 203 aa12.51□□□□□ -0.41
RTFDC1-204ENST00000449062 IGKV3D-15A0A087WSY6 115 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 TMEM72A0PK05 275 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 ZNF716A6NP11 495 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 ZNF724A8MTY0 619 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 SULT2B1O00204 365 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 KLF4O43474 513 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 PMS2P2O95744 297 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 ARAFP10398 606 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 IMPDH2P12268 514 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 ETS2P15036 469 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 PSMB1P20618 241 aaKnown RBP12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 CRYGSP22914 178 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 POLR2HP52434 150 aaKnown RBP12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 IST1P53990 364 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 LIN52Q52LA3 116 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 ANKRD34AQ69YU3 496 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 TFAP2EQ6VUC0 442 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 SPNS3Q6ZMD2 512 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 BEND4Q6ZU67 534 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 COMTD1Q86VU5 262 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 SLC35B4Q969S0 331 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 TMEM38AQ9H6F2 299 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 ST6GALNAC2Q9UJ37 374 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 ZNF232Q9UNY5 417 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 IFT52Q9Y366 437 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 ARID1AO14497 2285 aa12.5□□□□□ -0.41
RTFDC1-204ENST00000449062 ALPK2Q86TB3 2170 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 A0A0G2JND7 137 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 ZC3H12DA2A288 527 aaKnown RBP12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 CASKO14936 926 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 DNPH1O43598 174 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 RAMP1O60894 148 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 NPIPB7O75200 414 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 FESP07332 822 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 PPIBP23284 216 aaKnown RBP12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 OR3A2P47893 321 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 KCNJ5P48544 419 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 CSNK2A1P68400 391 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 RASGEF1BQ0VAM2 473 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 LARS2Q15031 903 aaKnown RBP12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 EXOC3L2Q2M3D2 409 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 TMEM201Q5SNT2 666 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 ABLIM2Q6H8Q1 611 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 ZNF550Q7Z398 422 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 BBS10Q8TAM1 723 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 NINJ1Q92982 152 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 ZNF775Q96BV0 537 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 ZNF300Q96RE9 604 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 CPPED1Q9BRF8 314 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 TACO1Q9BSH4 297 aaKnown RBP12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 POTEKPQ9BYX7 375 aa12.49□□□□□ -0.41
RTFDC1-204ENST00000449062 KLHL4Q9C0H6 718 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms