RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 CXCR1P25024 350 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 ELK4P28324 431 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 MAP2K6P52564 334 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 UGT2B15P54855 530 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 PPIAP62937 165 aaKnown RBP12.71□□□□□ -0.38
SHMT2-203ENST00000449049 FOXK1P85037 733 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 TOMM20Q15388 145 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 TAF11Q15544 211 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 RNFT1Q5M7Z0 435 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 OGFRL1Q5TC84 451 aaPredicted RBP12.71□□□□□ -0.38
SHMT2-203ENST00000449049 ZNF770Q6IQ21 691 aaPredicted RBP12.71□□□□□ -0.38
SHMT2-203ENST00000449049 TTC33Q6PID6 262 aaPredicted RBP12.71□□□□□ -0.38
SHMT2-203ENST00000449049 C19orf48Q6RUI8 117 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 TBPL2Q6SJ96 375 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 ZNF730Q6ZMV8 503 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 MBOAT2Q6ZWT7 520 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 ZDHHC13Q8IUH4 622 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 RNF113BQ8IZP6 322 aaKnown RBP12.71□□□□□ -0.38
SHMT2-203ENST00000449049 HS3ST5Q8IZT8 346 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 LINC00471Q8N535 108 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 EXD3Q8N9H8 876 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 OR4K5Q8NGD3 323 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 OR14L1PQ8NHC6 308 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 GIPC3Q8TF64 312 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 PNPLA2Q96AD5 504 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 CIB1Q99828 191 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 PIGQQ9BRB3 760 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 SLC19A3Q9BZV2 496 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 ZDHHC11Q9H8X9 412 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 ZNF71Q9NQZ8 489 aaPredicted RBP12.71□□□□□ -0.38
SHMT2-203ENST00000449049 PDP1Q9P0J1 537 aaPredicted RBP12.71□□□□□ -0.38
SHMT2-203ENST00000449049 STOML1Q9UBI4 398 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 CHRNA9Q9UGM1 479 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 RPH3AQ9Y2J0 694 aaPredicted RBP12.71□□□□□ -0.38
SHMT2-203ENST00000449049 MAGED1Q9Y5V3 778 aaPredicted RBP12.71□□□□□ -0.38
SHMT2-203ENST00000449049 IGF2RP11717 2491 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 TMEM72A0PK05 275 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 EFNA2O43921 213 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 SUSD5O60279 629 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 TRAPPC6AO75865 159 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 PEX2P28328 305 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 PEX19P40855 299 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 LSM11P83369 360 aaKnown RBP eCLIP12.7□□□□□ -0.38
SHMT2-203ENST00000449049 SELENBP1Q13228 472 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 PLEKHN1Q494U1 663 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-203ENST00000449049 CMPK2Q5EBM0 449 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 RAET1LQ5VY80 246 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 POMZP3Q6PJE2 187 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 YRDCQ86U90 279 aaKnown RBP12.7□□□□□ -0.38
SHMT2-203ENST00000449049 LSRQ86X29 649 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-203ENST00000449049 OR10G2Q8NGC3 310 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 OR5M1Q8NGP8 315 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 NRG4Q8WWG1 115 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 C9orf16Q9BUW7 83 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 ACKR4Q9NPB9 350 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 PTPRQQ9UMZ3 2332 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 OR2M5A3KFT3 312 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 ZNF208O43345 1280 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 AHCYL1O43865 530 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 CELA3AP09093 270 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 ZNF24P17028 368 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 IL11P20809 199 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 TCEA1P23193 301 aaKnown RBP12.7□□□□□ -0.38
SHMT2-203ENST00000449049 EGR4Q05215 589 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 NADK2Q4G0N4 442 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 WIPI1Q5MNZ9 446 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-203ENST00000449049 LPCAT4Q643R3 524 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 OR9Q2Q8NGE9 314 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 EME1Q96AY2 570 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 SDCCAG3Q96C92 435 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 TAAR6Q96RI8 345 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 UBL7Q96S82 380 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-203ENST00000449049 MEPEQ9NQ76 525 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-203ENST00000449049 SERINC1Q9NRX5 453 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 MED31Q9Y3C7 131 aa12.7□□□□□ -0.38
SHMT2-203ENST00000449049 A8MVM7 634 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 PDLIM1O00151 329 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 PIP5K1CO60331 668 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 OR10H3O60404 316 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 NPIPB7O75200 414 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 IGF2P01344 180 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 GFRA1P56159 465 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 CTBP2P56545 445 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 PRKCDQ05655 676 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.69□□□□□ -0.38
SHMT2-203ENST00000449049 C3orf33Q6P1S2 294 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 PGBD2Q6P3X8 592 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 STK32CQ86UX6 486 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 NRMQ8IXM6 262 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 PFN4Q8NHR9 129 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 STK35Q8TDR2 534 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 OSBPL10Q9BXB5 764 aa12.69□□□□□ -0.38
SHMT2-203ENST00000449049 SPIN1Q9Y657 262 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-203ENST00000449049 ENO4A6NNW6 628 aa12.68□□□□□ -0.38
SHMT2-203ENST00000449049 LINC01387J3KSC0 135 aa12.68□□□□□ -0.38
SHMT2-203ENST00000449049 CCNA2P20248 432 aa12.68□□□□□ -0.38
SHMT2-203ENST00000449049 PTNP21246 168 aa12.68□□□□□ -0.38
SHMT2-203ENST00000449049 PRKACGP22612 351 aa12.68□□□□□ -0.38
SHMT2-203ENST00000449049 CBLP22681 906 aa12.68□□□□□ -0.38
SHMT2-203ENST00000449049 FKBP2P26885 142 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms