RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 MAPRE2Q15555 327 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 NANOGP8Q6NSW7 305 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 FCRLAQ7L513 359 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 ZNF550Q7Z398 422 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 ZNF610Q8N9Z0 462 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 C11orf65Q8NCR3 313 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 HIPK4Q8NE63 616 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 OR10A6Q8NH74 314 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 LINC01560Q8TB33 94 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 SLC25A43Q8WUT9 341 aaPredicted RBP13.24□□□□□ -0.29
HDAC4-204ENST00000446876 LRRC58Q96CX6 371 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 REXO5Q96IC2 774 aaKnown RBP13.24□□□□□ -0.29
HDAC4-204ENST00000446876 C12orf49Q9H741 205 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 KAT8Q9H7Z6 458 aaKnown RBP13.24□□□□□ -0.29
HDAC4-204ENST00000446876 NANOGQ9H9S0 305 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 FOXD3Q9UJU5 478 aaPredicted RBP13.24□□□□□ -0.29
HDAC4-204ENST00000446876 PROCRQ9UNN8 238 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 USP22Q9UPT9 525 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 ANGPT4Q9Y264 503 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 EMC9Q9Y3B6 208 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 SPIN1Q9Y657 262 aaPredicted RBP13.24□□□□□ -0.29
HDAC4-204ENST00000446876 DCHS2Q6V1P9 2916 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 ABCA12Q86UK0 2595 aa13.24□□□□□ -0.29
HDAC4-204ENST00000446876 FREM1Q5H8C1 2179 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 ZC3H12DA2A288 527 aaKnown RBP13.23□□□□□ -0.29
HDAC4-204ENST00000446876 BBIP1A8MTZ0 92 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 SULT2B1O00204 365 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 DYNC1I1O14576 645 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 SMAD9O15198 467 aaKnown RBP13.23□□□□□ -0.29
HDAC4-204ENST00000446876 GCM2O75603 506 aaPredicted RBP13.23□□□□□ -0.29
HDAC4-204ENST00000446876 AGTR1P30556 359 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 PRKAR1BP31321 381 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 HTR3AP46098 478 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 GZMMP51124 257 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 RAC3P60763 192 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 GNGT1P63211 74 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 DMTNQ08495 405 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 FAM27E3Q08E93 113 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 BNIP2Q12982 314 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 CYLC2Q14093 348 aaPredicted RBP13.23□□□□□ -0.29
HDAC4-204ENST00000446876 EEF1A1P5Q5VTE0 462 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 TMPPEQ6ZT21 453 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 NUFIP2Q7Z417 695 aaKnown RBP13.23□□□□□ -0.29
HDAC4-204ENST00000446876 NET1Q7Z628 596 aaPredicted RBP13.23□□□□□ -0.29
HDAC4-204ENST00000446876 KRT73Q86Y46 540 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 TREML1Q86YW5 311 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 TUSC5Q8IXB3 177 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 OR6K3Q8NGY3 331 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 RCN3Q96D15 328 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 C14orf79Q96F83 325 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 WFDC6Q9BQY6 131 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 ZNF559Q9BR84 538 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 PRR14Q9BWN1 585 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 ADAM19Q9H013 955 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 ARMC7Q9H6L4 198 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 MRGBPQ9NV56 204 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 KCNN3Q9UGI6 736 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 NOTCH2Q04721 2471 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 MAST4O15021 2626 aa13.23□□□□□ -0.29
HDAC4-204ENST00000446876 ZNF814B7Z6K7 855 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 CD8BP10966 210 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 HTR2AP28223 471 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 ADSLP30566 484 aaPredicted RBP13.22□□□□□ -0.29
HDAC4-204ENST00000446876 SSTR2P30874 369 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 CCKARP32238 428 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 PCBP3P57721 371 aaKnown RBP13.22□□□□□ -0.29
HDAC4-204ENST00000446876 COPZ1P61923 177 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 ZSWIM7Q19AV6 140 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 EXOC3L2Q2M3D2 409 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 COQ5Q5HYK3 327 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 WBP2NLQ6ICG8 309 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 DHRS4L2Q6PKH6 230 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 MTDHQ86UE4 582 aaKnown RBP13.22□□□□□ -0.29
HDAC4-204ENST00000446876 KIF18BQ86Y91 864 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 ARMC8Q8IUR7 673 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 SMYD1Q8NB12 490 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 C3orf49Q96BT1 292 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 ZNF775Q96BV0 537 aaPredicted RBP13.22□□□□□ -0.29
HDAC4-204ENST00000446876 ZNF300Q96RE9 604 aaPredicted RBP13.22□□□□□ -0.29
HDAC4-204ENST00000446876 SPATA5L1Q9BVQ7 753 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 KLHL13Q9P2N7 655 aa13.22□□□□□ -0.29
HDAC4-204ENST00000446876 ING1Q9UK53 422 aaPredicted RBP13.22□□□□□ -0.29
HDAC4-204ENST00000446876 ANKHD1Q8IWZ3 2542 aaKnown RBP13.22□□□□□ -0.29
HDAC4-204ENST00000446876 APCP25054 2843 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 TUBAL3A6NHL2 446 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 SLC22A2O15244 555 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 RAMP1O60894 148 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 PRKD3O94806 890 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 MFN2O95140 757 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 PMS2P2O95744 297 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 IMPDH2P12268 514 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 COX4I1P13073 169 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 CXCR1P25024 350 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 PCGF2P35227 344 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 CD79BP40259 229 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 KCNJ5P48544 419 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 OR2B6P58173 313 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 CSNK2A1P68400 391 aaPredicted RBP13.21□□□□□ -0.29
HDAC4-204ENST00000446876 SORDQ00796 357 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 RBBP4Q09028 425 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms