RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 MCATQ8IVS2 390 aaKnown RBP12.9□□□□□ -0.34
VPS52-212ENST00000445902 NAXDQ8IW45 347 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 LINC00469Q8N7U9 141 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 CPEB1Q9BZB8 566 aaKnown RBP12.9□□□□□ -0.34
VPS52-212ENST00000445902 ACSS1Q9NUB1 689 aaPredicted RBP12.9□□□□□ -0.34
VPS52-212ENST00000445902 ST6GALNAC2Q9UJ37 374 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 SLC25A13Q9UJS0 675 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 LSM7Q9UK45 103 aaKnown RBP12.9□□□□□ -0.34
VPS52-212ENST00000445902 OR10H1Q9Y4A9 318 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 CENPVL1A0A0U1RR11 272 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 F5H5P2 479 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 CTDSPLO15194 276 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 PRAMEF2O60811 474 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 ECDO95905 644 aaPredicted RBP12.9□□□□□ -0.34
VPS52-212ENST00000445902 ELFN1P0C7U0 828 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 GKN3PP0CG01 181 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 TMIGD3P0DMS9 266 aaPredicted RBP12.9□□□□□ -0.34
VPS52-212ENST00000445902 CALCRP30988 508 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 RECQLP46063 649 aaPredicted RBP12.9□□□□□ -0.34
VPS52-212ENST00000445902 HOXA1P49639 335 aaPredicted RBP12.9□□□□□ -0.34
VPS52-212ENST00000445902 CSRP2Q16527 193 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 BEX5Q5H9J7 111 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 WDR88Q6ZMY6 472 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 ZFP82Q8N141 532 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 DOK4Q8TEW6 326 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 CYB5D2Q8WUJ1 264 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 ZMYND19Q96E35 227 aaPredicted RBP12.9□□□□□ -0.34
VPS52-212ENST00000445902 C1QTNF2Q9BXJ5 285 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 PBX4Q9BYU1 374 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 NOX4Q9NPH5 578 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 SLC39A1Q9NY26 324 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 HS3ST2Q9Y278 367 aa12.9□□□□□ -0.34
VPS52-212ENST00000445902 A0A087WV48 116 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 UBE2QL1A1L167 161 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 MEIS3P1A6NDR6 274 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 H3BSH0 61 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 BHLHE40O14503 412 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 LCMT2O60294 686 aaKnown RBP12.9□□□□□ -0.35
VPS52-212ENST00000445902 CDC123O75794 336 aaPredicted RBP12.9□□□□□ -0.35
VPS52-212ENST00000445902 P2RX1P51575 399 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 DLX5P56178 289 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 AP3S2P59780 193 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 FOXK2Q01167 660 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 IRF5Q13568 498 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 ZNF805Q5CZA5 627 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 ZC3H14Q6PJT7 736 aaKnown RBP12.9□□□□□ -0.35
VPS52-212ENST00000445902 ZNF793Q6ZN11 406 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 SYNPRQ8TBG9 265 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 TNFAIP8L1Q8WVP5 186 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 RAD51AP1Q96B01 352 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 CNRIP1Q96F85 164 aaPredicted RBP12.9□□□□□ -0.35
VPS52-212ENST00000445902 PPP1R16AQ96I34 528 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 PAWRQ96IZ0 340 aaKnown RBP12.9□□□□□ -0.35
VPS52-212ENST00000445902 GFI1Q99684 422 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 SIDT1Q9NXL6 827 aaKnown RBP12.9□□□□□ -0.35
VPS52-212ENST00000445902 KLHL28Q9NXS3 571 aa12.9□□□□□ -0.35
VPS52-212ENST00000445902 TRBV2A0A0J9YWF9 115 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 TIMP2P16035 220 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 ART1P52961 327 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 TAS2R43P59537 309 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 TAF1CQ15572 869 aaPredicted RBP12.89□□□□□ -0.35
VPS52-212ENST00000445902 LTB4RQ15722 352 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 HYAL4Q2M3T9 481 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 ELFN2Q5R3F8 820 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 MPP7Q5T2T1 576 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 BAIAP2L2Q6UXY1 529 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.89□□□□□ -0.35
VPS52-212ENST00000445902 MUC20Q8N307 709 aaPredicted RBP12.89□□□□□ -0.35
VPS52-212ENST00000445902 TMEM185AQ8NFB2 350 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 OR4D10Q8NGI6 311 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 NSMAFQ92636 917 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 CD180Q99467 661 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 AIF1LQ9BQI0 150 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 KLHL31Q9H511 634 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 C6orf106Q9H6K1 298 aaPredicted RBP12.89□□□□□ -0.35
VPS52-212ENST00000445902 ANKRD10Q9NXR5 420 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 GNG8Q9UK08 70 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 LRFN2Q9ULH4 789 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 PCYT1BQ9Y5K3 369 aaPredicted RBP12.89□□□□□ -0.35
VPS52-212ENST00000445902 LRRK1Q38SD2 2015 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 TRAV1-2A0A0B4J238 106 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 ANKRD20A5PA0PJZ0 165 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 SLC22A31A6NKX4 558 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 PRSS44E7EML9 344 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 ARL6IP5O75915 188 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 PTH2RP49190 550 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 CBFBQ13951 182 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 HAGHLQ6PII5 290 aaPredicted RBP12.89□□□□□ -0.35
VPS52-212ENST00000445902 EIF4E3Q8N5X7 224 aaKnown RBP12.89□□□□□ -0.35
VPS52-212ENST00000445902 OR9A2Q8NGT5 310 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 PELI1Q96FA3 418 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 DNTTIP1Q9H147 329 aa12.89□□□□□ -0.35
VPS52-212ENST00000445902 AKAP7Q9P0M2 348 aaPredicted RBP12.89□□□□□ -0.35
VPS52-212ENST00000445902 FAM86C2PA6NEL3 165 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 HMSDA8MTL9 139 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 MPTX1A8MV57 137 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 IDSB3KWA1 339 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 DISC1C4P0D8 188 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 NRG2O14511 850 aaPredicted RBP12.88□□□□□ -0.35
VPS52-212ENST00000445902 NDUFB6O95139 128 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms