RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 OR52P1PQ8NH57 321 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 SPDL1Q96EA4 605 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 ALPK1Q96QP1 1244 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 USB1Q9BQ65 265 aaKnown RBP16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 BCL2L10Q9HD36 194 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 SLC52A3Q9NQ40 469 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 CCM2LQ9NUG4 571 aaPredicted RBP16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 CCDC167Q9P0B6 97 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 ING1Q9UK53 422 aaPredicted RBP16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 TRAPPC4Q9Y296 219 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 AKAP9Q99996 3911 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 HIVEP1P15822 2718 aa16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 BCHEP06276 602 aa16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 PPIBP23284 216 aaKnown RBP16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 POLR2HP52434 150 aaKnown RBP16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 RASGEF1BQ0VAM2 473 aa16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 EPS8Q12929 822 aa16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 SQLEQ14534 574 aa16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 LARS2Q15031 903 aaKnown RBP16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 P2RY6Q15077 328 aa16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 NUFIP2Q7Z417 695 aaKnown RBP16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 ZHX1-C8orf76Q96EF9 292 aa16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 TMEM19Q96HH6 336 aa16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 ARMC7Q9H6L4 198 aa16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 C12orf49Q9H741 205 aa16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 A4GALTQ9NPC4 353 aa16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 ZNF232Q9UNY5 417 aa16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 PLEKHA6Q9Y2H5 1048 aa16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 IFT52Q9Y366 437 aa16.75■□□□□ 0.27
ATPAF2-201ENST00000444058 IGKV3D-15A0A087WSY6 115 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 A0A1W2PPR1 153 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 AP3D1O14617 1153 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 SIAH2O43255 324 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 GCM2O75603 506 aaPredicted RBP16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 SASH3O75995 380 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 ATE1O95260 518 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 CNOT4O95628 575 aaKnown RBP16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 TFPIP10646 304 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 KEAP1Q14145 624 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 POU4F3Q15319 338 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 C22orf34Q6ZV56 151 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 ZNF550Q7Z398 422 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 STEAP2Q8NFT2 490 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 SLC35B4Q969S0 331 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 ARL5BQ96KC2 179 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 ADAM19Q9H013 955 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 CACYBPQ9HB71 228 aaKnown RBP16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 RLIMQ9NVW2 624 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 SLC25A37Q9NYZ2 338 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 C6orf203Q9P0P8 240 aaPredicted RBP16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 OSGIN1Q9UJX0 560 aa16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 TEP1Q99973 2627 aaKnown RBP16.74■□□□□ 0.27
ATPAF2-201ENST00000444058 TMED7-TICAM2A0A0A6YYA0 188 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 IGHV3-15A0A0B4J1V0 119 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 A0A1W2PP18 115 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 FESP07332 822 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 TACR3P29371 465 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 OR3A2P47893 321 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 ABLIM2Q6H8Q1 611 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 ZNF836Q6ZNA1 936 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 VRK2Q86Y07 508 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 DDIT4LQ96D03 193 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 SPATA9Q9BWV2 254 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 ACTR6Q9GZN1 396 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 EMC3Q9P0I2 261 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 TMEM181Q9P2C4 612 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 TRIM33Q9UPN9 1127 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 CORO2BQ9UQ03 480 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 ZNF443Q9Y2A4 671 aaPredicted RBP16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 TMED7Q9Y3B3 224 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 CELSR1Q9NYQ6 3014 aa16.73■□□□□ 0.27
ATPAF2-201ENST00000444058 TRBV5-3A0A0A0MS03 114 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 NR5A2O00482 541 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 EIF1BO60739 113 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 EDF1O60869 148 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 THBDP07204 575 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 NUDT7P0C024 238 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 ETS2P15036 469 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 ACAA2P42765 397 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 SLC16A1P53985 500 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 COPZ1P61923 177 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 H3F3AP84243 136 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 AGKQ53H12 422 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 BEX5Q5H9J7 111 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 SFRP5Q5T4F7 317 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 METTL21CQ5VZV1 264 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 ANKRD34AQ69YU3 496 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 Q6ZT83 130 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 GALNT5Q7Z7M9 940 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 MSRB3Q8IXL7 192 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 BBS10Q8TAM1 723 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 PIGXQ8TBF5 258 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 PIK3IP1Q96FE7 263 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 ZC3HAV1LQ96H79 300 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 SLAMF8Q9P0V8 285 aa16.72■□□□□ 0.27
ATPAF2-201ENST00000444058 ZNF814B7Z6K7 855 aa16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 GPR171O14626 319 aa16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 GPX2P18283 190 aa16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 NR1H2P55055 460 aa16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 SLC35A1P78382 337 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms