RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 TACR3P29371 465 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 LRIF1Q5T3J3 769 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 GCNT6Q5T4J0 391 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 RNF220Q5VTB9 566 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 ZNF440Q8IYI8 595 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 CADM2Q8N3J6 435 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 NINJ1Q92982 152 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 ZNF775Q96BV0 537 aaPredicted RBP18.74■□□□□ 0.59
CDKN3-204ENST00000442975 ARL5BQ96KC2 179 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 PSD2Q9BQI7 771 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 ACTR6Q9GZN1 396 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 RABEP2Q9H5N1 569 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 TMED7Q9Y3B3 224 aa18.74■□□□□ 0.59
CDKN3-204ENST00000442975 CELSR1Q9NYQ6 3014 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 A0A0G2JPF8 293 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 HNRNPCL2B2RXH8 293 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 HNRNPCL3B7ZW38 293 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 CYTIPO60759 359 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 HNRNPCL1O60812 293 aaKnown RBP18.73■□□□□ 0.59
CDKN3-204ENST00000442975 HNRNPCL4P0DMR1 293 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 CRYGSP22914 178 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 SLC1A3P43003 542 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 OR2B6P58173 313 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 IRX1P78414 480 aaPredicted RBP18.73■□□□□ 0.59
CDKN3-204ENST00000442975 KEAP1Q14145 624 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 TESK1Q15569 626 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 ALKBH2Q6NS38 261 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.73■□□□□ 0.59
CDKN3-204ENST00000442975 CXorf67Q86X51 503 aaPredicted RBP18.73■□□□□ 0.59
CDKN3-204ENST00000442975 ADGRG3Q86Y34 549 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 BBS10Q8TAM1 723 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 ZNF300Q96RE9 604 aaPredicted RBP18.73■□□□□ 0.59
CDKN3-204ENST00000442975 BCO1Q9HAY6 547 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 ZNF446Q9NWS9 450 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 VAPAQ9P0L0 249 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 OSGIN1Q9UJX0 560 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 ZNF232Q9UNY5 417 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 HDGFL3Q9Y3E1 203 aa18.73■□□□□ 0.59
CDKN3-204ENST00000442975 AKAP6Q13023 2319 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 A0A1W2PPR1 153 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 TMEM72A0PK05 275 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 DEFB108AA8MXU0 73 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 SIAH2O43255 324 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 THBS1P07996 1170 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 PPIBP23284 216 aaKnown RBP18.72■□□□□ 0.59
CDKN3-204ENST00000442975 COPZ1P61923 177 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 ZNF311Q5JNZ3 666 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 ABLIM2Q6H8Q1 611 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 CLIP4Q8N3C7 705 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 NFKBIDQ8NI38 313 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 STON2Q8WXE9 905 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 DDIT4LQ96D03 193 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 SIKE1Q9BRV8 207 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 ARMC7Q9H6L4 198 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 PLEKHF2Q9H8W4 249 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 SLC52A3Q9NQ40 469 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 TMEM45AQ9NWC5 275 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 EMC3Q9P0I2 261 aa18.72■□□□□ 0.59
CDKN3-204ENST00000442975 ING1Q9UK53 422 aaPredicted RBP18.72■□□□□ 0.59
CDKN3-204ENST00000442975 A0A1W2PP18 115 aa18.71■□□□□ 0.59
CDKN3-204ENST00000442975 FAAHO00519 579 aa18.71■□□□□ 0.59
CDKN3-204ENST00000442975 ANGPT2O15123 496 aa18.71■□□□□ 0.59
CDKN3-204ENST00000442975 RAF1P04049 648 aa18.71■□□□□ 0.59
CDKN3-204ENST00000442975 BMP2P12643 396 aa18.71■□□□□ 0.59
CDKN3-204ENST00000442975 PRG2P13727 222 aa18.71■□□□□ 0.59
CDKN3-204ENST00000442975 PPP3CBP16298 524 aa18.71■□□□□ 0.59
CDKN3-204ENST00000442975 IL32P24001 234 aa18.71■□□□□ 0.59
CDKN3-204ENST00000442975 TSC22D1Q15714 1073 aa18.71■□□□□ 0.59
CDKN3-204ENST00000442975 C22orf34Q6ZV56 151 aa18.71■□□□□ 0.59
CDKN3-204ENST00000442975 MTDHQ86UE4 582 aaKnown RBP18.71■□□□□ 0.59
CDKN3-204ENST00000442975 WFDC8Q8IUA0 241 aa18.71■□□□□ 0.59
CDKN3-204ENST00000442975 C10orf111Q8N326 155 aa18.71■□□□□ 0.59
CDKN3-204ENST00000442975 SPATA9Q9BWV2 254 aa18.71■□□□□ 0.59
CDKN3-204ENST00000442975 LEF1Q9UJU2 399 aaPredicted RBP18.71■□□□□ 0.59
CDKN3-204ENST00000442975 IFT52Q9Y366 437 aa18.71■□□□□ 0.59
CDKN3-204ENST00000442975 ZC3H12DA2A288 527 aaKnown RBP18.7■□□□□ 0.58
CDKN3-204ENST00000442975 FRS3O43559 492 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 PMS2P2O95744 297 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 PSMB1P20618 241 aaKnown RBP18.7■□□□□ 0.58
CDKN3-204ENST00000442975 FKBP2P26885 142 aaKnown RBP18.7■□□□□ 0.58
CDKN3-204ENST00000442975 CLK1P49759 484 aaKnown RBP18.7■□□□□ 0.58
CDKN3-204ENST00000442975 SF3A3Q12874 501 aaKnown RBP eCLIP18.7■□□□□ 0.58
CDKN3-204ENST00000442975 ZSWIM7Q19AV6 140 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 PRAMEF8Q5VWM4 474 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 PRAMEF7Q5VXH5 474 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 GALNT5Q7Z7M9 940 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 DHDDSQ86SQ9 333 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 SERPINA11Q86U17 422 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 GABRG1Q8N1C3 465 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 PIGXQ8TBF5 258 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 S100PBPQ96BU1 408 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 TMEM120AQ9BXJ8 343 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 IKZF5Q9H5V7 419 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 ZNF385DQ9H6B1 395 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 BCL2L10Q9HD36 194 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 TMEM181Q9P2C4 612 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 PRSS50Q9UI38 385 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 CORO2BQ9UQ03 480 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 GPR52Q9Y2T5 361 aa18.7■□□□□ 0.58
CDKN3-204ENST00000442975 TRBV5-3A0A0A0MS03 114 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms