RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 OMA1Q96E52 524 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 HPDLQ96IR7 371 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ST6GAL2Q96JF0 529 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 B3GALT6Q96L58 329 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 IL12RB2Q99665 862 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 C7orf50Q9BRJ6 194 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 RBM24Q9BX46 236 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 FAM49AQ9H0Q0 323 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 POLR3FQ9H1D9 316 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 KAT8Q9H7Z6 458 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 CMTM6Q9NX76 183 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ELF5Q9UKW6 265 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 WDR7Q9Y4E6 1490 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 PCDH11XQ9BZA7 1347 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 A0A0A6YYH2 397 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 A0A0G2JLW4 131 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 A0A1B0GW15 77 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 A0A1W2PS18 150 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 MBLAC1A4D2B0 266 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 FABP12A6NFH5 140 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 A6NJ64 397 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ERI2A8K979 691 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 C2orf74A8MZ97 194 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 E7ESA3 106 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 LRRN3E7EW58 273 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ATP6V1G2-DDX39BF2Z307 99 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 KLRC4-KLRK1H3BQV0 150 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 SGK494L7N484 410 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 CCSO14618 274 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 CLOCKO15516 846 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 PRKNO60260 465 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 SDC3O75056 442 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ADAP1O75689 374 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 OAZ2O95190 189 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 LYNP07948 512 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ANXA4P09525 319 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 TRIM49P0CI25 452 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 TRIM49CP0CI26 452 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 PSKH1P11801 424 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF7P17097 686 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 GNA11P29992 359 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 NR4A2P43354 598 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 OR3A2P47893 321 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 TPMTP51580 245 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 CCNG1P51959 295 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 AP3S2P59780 193 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZFP36L1Q07352 338 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 FCHO2Q0JRZ9 810 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 STX3Q13277 289 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 P2RY14Q15391 338 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 SSX2Q16385 188 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 TMEM44Q2T9K0 475 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF699Q32M78 642 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 SPANXN4Q5MJ08 99 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC22A10Q63ZE4 541 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 UQCC3Q6UW78 93 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 CWC27Q6UX04 472 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 IDO2Q6ZQW0 420 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 Q6ZRG5 221 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 NAGSQ8N159 534 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ALLCQ8N6M5 410 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 WDR36Q8NI36 951 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 SCRN2Q96FV2 425 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 CERS2Q96G23 380 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 VSTM2LQ96N03 204 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 UHRF2Q96PU4 802 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 CSPG4P5Q96PW8 444 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 GSDMCQ9BYG8 508 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 YIPF3Q9GZM5 350 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 LRRN3Q9H3W5 708 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 FNDC4Q9H6D8 234 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 C20orf96Q9NUD7 363 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 IMP3Q9NV31 184 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 NDE1Q9NXR1 346 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ADAM22Q9P0K1 906 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 RAB23Q9ULC3 237 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC6A5Q9Y345 797 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 TOP2AP11388 1531 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ABCA10Q8WWZ4 1543 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 ARHGEF12Q9NZN5 1544 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 FANCAO15360 1455 aa3.56□□□□□ -1.84
CDC42BPA-207ENST00000441725 IGHV4-61A0A0C4DH41 118 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 GNG14A0A1W2PPG7 69 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 LINC00587B1AMM8 73 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 E5RI56 91 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 H0YL77 283 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 H3BMH7 237 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 DUX1O43812 170 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 NOS1APO75052 506 aaPredicted RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 STK17BO94768 372 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 NXPH2O95156 264 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 NGFP01138 241 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 IGHV4-59P01825 116 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 PLEKP08567 350 aaPredicted RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 F7P08709 466 aaPredicted RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 MCF2P10911 925 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 CEBPBP17676 345 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 RPL35AP18077 110 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 CDH5P33151 784 aaPredicted RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 CEACAM3P40198 252 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms