RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 ACTA1P68133 377 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 TUBA1BP68363 451 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ISXQ2M1V0 245 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.51□□□□□ -1.53
VPS50-205ENST00000441602 GPR139Q6DWJ6 353 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 TUBA1AQ71U36 451 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 GRINAQ7Z429 371 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ATG4DQ86TL0 474 aaPredicted RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 MARCH3Q86UD3 253 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 JAZF1Q86VZ6 243 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 MEX3DQ86XN8 651 aaKnown RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 RAB43Q86YS6 212 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ESX1Q8N693 406 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 STK35Q8TDR2 534 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 SGCDQ92629 289 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 NACC2Q96BF6 587 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ZHX1-C8orf76Q96EF9 292 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ERMAPQ96PL5 475 aaPredicted RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 MGLLQ99685 303 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 DCUN1D5Q9BTE7 237 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ASPNQ9BXN1 380 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ATP13A2Q9NQ11 1180 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 NANSQ9NR45 359 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 NSG1A0A0A6YYJ2 146 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 CDC14CA4D256 554 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ANKUB1A6NFN9 424 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 BCAS1O75363 584 aaPredicted RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 TRIM3O75382 744 aaPredicted RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 PPP1R3DO95685 299 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 MT-CO3P00414 261 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 CCL4P13236 92 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 APEHP13798 732 aaKnown RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 FUT4P22083 530 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ZNF41P51814 821 aaPredicted RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 ZNF117Q03924 483 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 NFATC3Q12968 1075 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 SPHARQ15513 63 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 CD226Q15762 336 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 NDUFAF6Q330K2 333 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 FAM198BQ6UWH4 519 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 LINC00114Q6XXX2 140 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 USP43Q70EL4 1123 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 MEPCEQ7L2J0 689 aaKnown RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 SLC46A3Q7Z3Q1 461 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 CPOQ8IVL8 374 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 AMER2Q8N7J2 671 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 SLC38A9Q8NBW4 561 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 GALNT6Q8NCL4 622 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 OR6S1Q8NH40 331 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ZNF700Q9H0M5 742 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 PTGES2Q9H7Z7 377 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 FKRPQ9H9S5 495 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ZNF229Q9UJW7 825 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 SSR3Q9UNL2 185 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 PCDH15Q96QU1 1955 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 TMEM129A0AVI4 362 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 WWP2O00308 870 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 PLD2O14939 933 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ARPC3O15145 178 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 FADS1O60427 444 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 CSO75390 466 aaKnown RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 STK17BO94768 372 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 RENP00797 406 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 PSMA1P25786 263 aaKnown RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 C21orf33P30042 268 aaPredicted RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 SOX6P35712 828 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 SLC16A1P53985 500 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 FOXK2Q01167 660 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 MLLT11Q13015 90 aaPredicted RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 QPRTQ15274 297 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 TSTQ16762 297 aaKnown RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 KLHL12Q53G59 568 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 AADACL4Q5VUY2 407 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 WDR88Q6ZMY6 472 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 LINC00299Q6ZSB3 139 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ZNF248Q8NDW4 579 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 OR4K17Q8NGC6 315 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 OR52I1Q8NGK6 324 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 ASB15Q8WXK1 588 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 UFD1Q92890 307 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 LGALS12Q96DT0 336 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 TNFRSF13CQ96RJ3 184 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 SECISBP2Q96T21 854 aaKnown RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 TAPBPLQ9BX59 468 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 EXOSC4Q9NPD3 245 aaKnown RBP5.51□□□□□ -1.53
VPS50-205ENST00000441602 ABI3Q9P2A4 366 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 SCN2AQ99250 2005 aa5.51□□□□□ -1.53
VPS50-205ENST00000441602 TRAV27A0A087WT01 109 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 TMED7-TICAM2A0A0A6YYA0 188 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 A0A1W2PPW3 197 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 A8MVM7 634 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 CDC42EP2O14613 210 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 AKAP8O43823 692 aaKnown RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 PTP4A3O75365 173 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 CD59P13987 128 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 FKBP2P26885 142 aaKnown RBP5.5□□□□□ -1.53
VPS50-205ENST00000441602 WNT4P56705 351 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 TAS2R43P59537 309 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 ITGADQ13349 1161 aa5.5□□□□□ -1.53
VPS50-205ENST00000441602 EMC4Q5J8M3 183 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms