RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 POLR2HP52434 150 aaKnown RBP17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 ADAM8P78325 824 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 P2RY6Q15077 328 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 TSC22D1Q15714 1073 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 EPGNQ6UW88 154 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 ZNF704Q6ZNC4 412 aaPredicted RBP17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 C22orf34Q6ZV56 151 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 GALNT5Q7Z7M9 940 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 GABRG1Q8N1C3 465 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 PMM1Q92871 262 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 ZNF775Q96BV0 537 aaPredicted RBP17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 DDIT4LQ96D03 193 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 TMUB1Q9BVT8 246 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 OR11A1Q9GZK7 315 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 RAD21L1Q9H4I0 556 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 NGBQ9NPG2 151 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 SLC6A13Q9NSD5 602 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 THUMPD1Q9NXG2 353 aaKnown RBP17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 HDGFL3Q9Y3E1 203 aa17.64■□□□□ 0.41
SHROOM1-204ENST00000440118 PRR14LQ5THK1 2151 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 TMED7-TICAM2A0A0A6YYA0 188 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 ARHGEF9O43307 516 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 ZCCHC18P0CG32 403 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 OR3A2P47893 321 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 OR2B6P58173 313 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 COPZ1P61923 177 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 NKX6-1P78426 367 aaPredicted RBP17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 GTDC1Q4AE62 458 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 SFRP5Q5T4F7 317 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 ZNF440Q8IYI8 595 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 UBE2J2Q8N2K1 259 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 OR52P1PQ8NH57 321 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 PIGXQ8TBF5 258 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 AURKBQ96GD4 344 aaPredicted RBP17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 ARMC7Q9H6L4 198 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 TMED7Q9Y3B3 224 aa17.63■□□□□ 0.41
SHROOM1-204ENST00000440118 RAI1Q7Z5J4 1906 aaPredicted RBP17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 ZNF724A8MTY0 619 aa17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 NR5A2O00482 541 aa17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 GCM2O75603 506 aaPredicted RBP17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 TGDSO95455 350 aa17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 PMS2P2O95744 297 aa17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 RPS4Y1P22090 263 aaKnown RBP17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 TACR3P29371 465 aa17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 CLK1P49759 484 aaKnown RBP17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 ITGADQ13349 1161 aa17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 LARS2Q15031 903 aaKnown RBP17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 STK11Q15831 433 aa17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 ABLIM2Q6H8Q1 611 aa17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 BHLHA15Q7RTS1 189 aaPredicted RBP17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 MTDHQ86UE4 582 aaKnown RBP17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 CADM2Q8N3J6 435 aa17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 WFDC11Q8NEX6 87 aa17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 POTEKPQ9BYX7 375 aa17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 SLCO1B3Q9NPD5 702 aa17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 PRSS50Q9UI38 385 aa17.62■□□□□ 0.41
SHROOM1-204ENST00000440118 C5orf58C9J3I9 102 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 CLOCKO15516 846 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 KLF4O43474 513 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 DNPH1O43598 174 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 LYZL6O75951 148 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 NCF2P19878 526 aaPredicted RBP17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 SLC1A3P43003 542 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 PLAURQ03405 335 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 TTMPQ5BVD1 217 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 RPS26P11Q5JNZ5 115 aaPredicted RBP17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 Q5PR19 223 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 SHEQ5VZ18 495 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 SLC2A7Q6PXP3 512 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 ZNF836Q6ZNA1 936 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 Q6ZT83 130 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 HDXQ7Z353 690 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 VRK2Q86Y07 508 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 SLC38A5Q8WUX1 472 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 APH1AQ96BI3 265 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 PERPQ96FX8 193 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 TMEM19Q96HH6 336 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 ARL5BQ96KC2 179 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 PIP5K1AQ99755 562 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 USB1Q9BQ65 265 aaKnown RBP17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 ESRP2Q9H6T0 727 aaKnown RBP17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 RLIMQ9NVW2 624 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 TMEM181Q9P2C4 612 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 ZNF232Q9UNY5 417 aa17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 ZNF443Q9Y2A4 671 aaPredicted RBP17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 NOSIPQ9Y314 301 aaKnown RBP17.61■□□□□ 0.41
SHROOM1-204ENST00000440118 TMEM72A0PK05 275 aa17.6■□□□□ 0.41
SHROOM1-204ENST00000440118 HMGB1P1B2RPK0 211 aaPredicted RBP17.6■□□□□ 0.41
SHROOM1-204ENST00000440118 GPR171O14626 319 aa17.6■□□□□ 0.41
SHROOM1-204ENST00000440118 ADAM11O75078 769 aa17.6■□□□□ 0.41
SHROOM1-204ENST00000440118 GKN3PP0CG01 181 aa17.6■□□□□ 0.41
SHROOM1-204ENST00000440118 CXCR1P25024 350 aa17.6■□□□□ 0.41
SHROOM1-204ENST00000440118 IDH3AP50213 366 aa17.6■□□□□ 0.41
SHROOM1-204ENST00000440118 AQP5P55064 265 aa17.6■□□□□ 0.41
SHROOM1-204ENST00000440118 SLC35A1P78382 337 aa17.6■□□□□ 0.41
SHROOM1-204ENST00000440118 EPS8Q12929 822 aa17.6■□□□□ 0.41
SHROOM1-204ENST00000440118 AP1ARQ63HQ0 302 aa17.6■□□□□ 0.41
SHROOM1-204ENST00000440118 ADGRG3Q86Y34 549 aa17.6■□□□□ 0.41
SHROOM1-204ENST00000440118 HSD17B8Q92506 261 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms