RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 FCRL6Q6DN72 434 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 FIGNL1Q6PIW4 674 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 KRT74Q7RTS7 529 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 LRRC17Q8N6Y2 441 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 CYB561A3Q8NBI2 242 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 OR11H7Q8NGC8 314 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 OR13C5Q8NGS8 318 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 OR5H6Q8NGV6 325 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 OR51A7Q8NH64 312 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 ANGPTL6Q8NI99 470 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 SMAP2Q8WU79 429 aaPredicted RBP15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 GHSRQ92847 366 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 GPR137Q96N19 417 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 SLCO1C1Q9NYB5 712 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 SLC23A1Q9UHI7 598 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 TRAV6A0A075B6T7 132 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 ZNF860A6NHJ4 632 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 FGF17O60258 216 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 BRINP1O60477 761 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 IFI6P09912 130 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 PEPDP12955 493 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 ZNF10P21506 573 aaPredicted RBP15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 AK4P27144 223 aaPredicted RBP15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 PYCR1P32322 319 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 FHL1Q13642 323 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 ARHGAP11AQ6P4F7 1023 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 LYPD4Q6UWN0 246 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 ABHD13Q7L211 337 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 SLC43A2Q8N370 569 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 OR1E3Q8WZA6 343 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 PHF21AQ96BD5 680 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 OR2M2Q96R28 347 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 ZNF426Q9BUY5 554 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 ZCCHC4Q9H5U6 513 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 IL21RQ9HBE5 538 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 TMEM27Q9HBJ8 222 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 ZFP64Q9NPA5 681 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 PRDM6Q9NQX0 595 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 POLE3Q9NRF9 147 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 ABRACLQ9P1F3 81 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 PILRAQ9UKJ1 303 aa15.11■□□□□ 0.01
CLCNKA-203ENST00000439316 KNL1Q8NG31 2342 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 A0A1W2PRG6 482 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 GXYLT2A0PJZ3 443 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 OGG1O15527 345 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 LDB3O75112 727 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 TCRBP04435 133 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 UGT2B7P16662 529 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 ATF1P18846 271 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 NT5EP21589 574 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 OR3A3P47888 321 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 MMP15P51511 669 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 KIAA1024LP59773 190 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 POU6F2P78424 691 aaPredicted RBP15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 MGAT2Q10469 447 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 PRICKLE4Q2TBC4 344 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 CD276Q5ZPR3 534 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 FAM109AQ8N4B1 249 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 RFLNBQ8N5W9 214 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 CAMKVQ8NCB2 501 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 TMEM52Q8NDY8 209 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 GRHL3Q8TE85 626 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 ARSGQ96EG1 525 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 MFRPQ9BY79 579 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 EVA1AQ9H8M9 152 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 MCCC2Q9HCC0 563 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 DIABLOQ9NR28 239 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 C2orf42Q9NWW7 574 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 STMN3Q9NZ72 180 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 MAT2BQ9NZL9 334 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 FLRT3Q9NZU0 649 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 PCOLCE2Q9UKZ9 415 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 ING4Q9UNL4 249 aa15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 MRPS2Q9Y399 296 aaKnown RBP15.1■□□□□ 0.01
CLCNKA-203ENST00000439316 LOC105369274A0A096LPK9 316 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 SERPINA3P01011 423 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 IFNGP01579 166 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 GYPBP06028 91 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 DRD5P21918 477 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 SLC6A6P31641 620 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 DGCR2P98153 550 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 GAS6Q14393 721 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 EXOSC7Q15024 291 aaKnown RBP15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 TCEA2Q15560 299 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 HSD17B12Q53GQ0 312 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 PRRT3Q5FWE3 981 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 ZAR1Q86SH2 424 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 SIAH3Q8IW03 269 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 OR4N4Q8N0Y3 316 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 SHISA5Q8N114 240 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 ZNF687Q8N1G0 1237 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 TOMM5Q8N4H5 51 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 CNOT9Q92600 299 aaKnown RBP15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 TNFRSF13CQ96RJ3 184 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 OR51J1Q9H342 316 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 RANBP3Q9H6Z4 567 aaPredicted RBP15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 LMAN1LQ9HAT1 526 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 PTTG3PQ9NZH4 202 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 USP36Q9P275 1121 aaKnown RBP15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 COPZ2Q9P299 210 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms