RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 CNR1P21554 472 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 GPR143P51810 404 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 METAP1P53582 386 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 LIM2P55344 173 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 DOC2BQ14184 412 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 FAM71E1Q6IPT2 247 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 ADAM5Q6NVV9 412 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 CEACAM19Q7Z692 300 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 GRASPQ7Z6J2 395 aaPredicted RBP14.68□□□□□ -0.06
DHFR-201ENST00000439211 C1orf216Q8TAB5 229 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 ZNF296Q8WUU4 475 aaPredicted RBP14.68□□□□□ -0.06
DHFR-201ENST00000439211 ZNF707Q96C28 371 aaPredicted RBP14.68□□□□□ -0.06
DHFR-201ENST00000439211 CNIH4Q9P003 139 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 TERTO14746 1132 aaKnown RBP14.68□□□□□ -0.06
DHFR-201ENST00000439211 ERI3O43414 337 aaKnown RBP14.68□□□□□ -0.06
DHFR-201ENST00000439211 MBP02144 154 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 C6P13671 934 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 RNF144AP50876 292 aaPredicted RBP14.68□□□□□ -0.06
DHFR-201ENST00000439211 RGS8P57771 180 aaPredicted RBP14.68□□□□□ -0.06
DHFR-201ENST00000439211 OR2B8PP59922 312 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 KHDRBS2Q5VWX1 349 aaKnown RBP14.68□□□□□ -0.06
DHFR-201ENST00000439211 PODNL1Q6PEZ8 512 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 SLC9B2Q86UD5 537 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 SLC7A13Q8TCU3 470 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 RGMAQ96B86 450 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 CHRDQ9H2X0 955 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 TMEM38AQ9H6F2 299 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 CYSLTR2Q9NS75 346 aa14.68□□□□□ -0.06
DHFR-201ENST00000439211 CDV3Q9UKY7 258 aaKnown RBP14.68□□□□□ -0.06
DHFR-201ENST00000439211 WASH3PC4AMC7 463 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 AKR1C3P42330 323 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 HBMQ6B0K9 141 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 NAXDQ8IW45 347 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 PLA2G15Q8NCC3 412 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 OR4F15Q8NGB8 312 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 DOK4Q8TEW6 326 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 JAM3Q9BX67 310 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 RHBGQ9H310 441 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 SYNDIG1Q9H7V2 258 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 SLC9B1P1A6NJY1 282 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 TCAPO15273 167 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 FADS1O60427 444 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 PRKRAO75569 313 aaKnown RBP14.67□□□□□ -0.06
DHFR-201ENST00000439211 RHOP08100 348 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 HTRA3P83110 453 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 GFOD2Q3B7J2 385 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 ZNF528Q3MIS6 628 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 PAPD4Q6PIY7 484 aaKnown RBP14.67□□□□□ -0.06
DHFR-201ENST00000439211 OAFQ86UD1 273 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 C12orf40Q86WS4 652 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 MS4A4EQ96PG1 132 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 POLDIP3Q9BY77 421 aaKnown RBP14.67□□□□□ -0.06
DHFR-201ENST00000439211 DEC1Q9P2X7 70 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 LSM2Q9Y333 95 aaKnown RBP14.67□□□□□ -0.06
DHFR-201ENST00000439211 TRBV23OR9-2A0A075B6M9 112 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 ZNF729A6NN14 1252 aaPredicted RBP14.67□□□□□ -0.06
DHFR-201ENST00000439211 EFCAB7A8K855 629 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 SC5DO75845 299 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 WNT1P04628 370 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 UBBP0CG47 229 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 UBCP0CG48 685 aaKnown RBP14.67□□□□□ -0.06
DHFR-201ENST00000439211 NME1P15531 152 aaKnown RBP14.67□□□□□ -0.06
DHFR-201ENST00000439211 ELAVL4P26378 380 aaKnown RBP14.67□□□□□ -0.06
DHFR-201ENST00000439211 CCR2P41597 374 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 RIDAP52758 137 aaKnown RBP14.67□□□□□ -0.06
DHFR-201ENST00000439211 TCTN3Q6NUS6 607 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 TMEM71Q6P5X7 295 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 CNKSR3Q6P9H4 555 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 MTSS1LQ765P7 747 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 ARL6IP6Q8N6S5 226 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 SPRYD4Q8WW59 207 aaPredicted RBP14.67□□□□□ -0.06
DHFR-201ENST00000439211 PPP1R16AQ96I34 528 aa14.67□□□□□ -0.06
DHFR-201ENST00000439211 DHCR7Q9UBM7 475 aaKnown RBP14.67□□□□□ -0.06
DHFR-201ENST00000439211 TMEM218A2RU14 115 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 SOX30O94993 753 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 HEXBP07686 556 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 SNRPBP14678 240 aaKnown RBP14.66□□□□□ -0.06
DHFR-201ENST00000439211 CSF2RAP15509 400 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 BTF3P20290 206 aaKnown RBP14.66□□□□□ -0.06
DHFR-201ENST00000439211 RPS27AP62979 156 aaKnown RBP14.66□□□□□ -0.06
DHFR-201ENST00000439211 UBA52P62987 128 aaKnown RBP14.66□□□□□ -0.06
DHFR-201ENST00000439211 TPBGQ13641 420 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 WDR53Q7Z5U6 358 aaPredicted RBP14.66□□□□□ -0.06
DHFR-201ENST00000439211 ARL11Q969Q4 196 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 ZNF514Q96K75 400 aaPredicted RBP14.66□□□□□ -0.06
DHFR-201ENST00000439211 CA10Q9NS85 328 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 ARID1BQ8NFD5 2236 aaPredicted RBP14.66□□□□□ -0.06
DHFR-201ENST00000439211 LOC100509620A0A075B734 347 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 PLSCR5A0PG75 271 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 URADA6NGE7 173 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 NFYBP25208 207 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 HCCSP53701 268 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 ZP1P60852 638 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 ZNF311Q5JNZ3 666 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 B3GNTL1Q67FW5 361 aaPredicted RBP14.66□□□□□ -0.06
DHFR-201ENST00000439211 ADIPOR2Q86V24 386 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 FBXO15Q8NCQ5 510 aaPredicted RBP14.66□□□□□ -0.06
DHFR-201ENST00000439211 GNPDA2Q8TDQ7 276 aa14.66□□□□□ -0.06
DHFR-201ENST00000439211 GCDHQ92947 438 aaPredicted RBP14.66□□□□□ -0.06
DHFR-201ENST00000439211 TMEM41AQ96HV5 264 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms