RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SLC22A5O76082 557 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 SLC2A10O95528 541 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 PVRP15151 417 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 PRKACBP22694 351 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 CLDN20P56880 219 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 GALEQ14376 348 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF542PQ5EBM4 170 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 RNASE10Q5GAN6 216 aaKnown RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 TMEM201Q5SNT2 666 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 OR6V1Q8N148 313 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 TMEM99Q8N816 258 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 MSLNLQ96KJ4 702 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 RBP7Q96R05 134 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 LMF1Q96S06 567 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 METTL8Q9H825 291 aaKnown RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 NRIP3Q9NQ35 241 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 SLC23A2Q9UGH3 650 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 MBD1Q9UIS9 605 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 TMPRSS11EQ9UL52 423 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 NTNG1Q9Y2I2 539 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF281Q9Y2X9 895 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 A0A1B0GWA3 101 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 PRSS38A1L453 326 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 TVP23AA6NH52 213 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 F5H5P2 479 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 ICMTO60725 284 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 CXCL10P02778 98 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 AMY2AP04746 511 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 CSF1P09603 554 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 PNMTP11086 282 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 PGAM2P15259 253 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 HSD11B1P28845 292 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 FGF9P31371 208 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 CCR6P51684 374 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 P2RY14Q15391 338 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 DUSP5Q16690 384 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 CCDC58Q4VC31 144 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 UBE2NLQ5JXB2 153 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 LHX8Q68G74 356 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF836Q6ZNA1 936 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 PNLDC1Q8NA58 520 aaKnown RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 GALNT11Q8NCW6 608 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 LSM14AQ8ND56 463 aaKnown RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 FBLIM1Q8WUP2 373 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 KLHDC7BQ96G42 594 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 MED30Q96HR3 178 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 TMEM41AQ96HV5 264 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 PLA2G12AQ9BZM1 189 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 MFFQ9GZY8 342 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 GDE1Q9NZC3 331 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 GLTPQ9NZD2 209 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF337Q9Y3M9 751 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 PRRT4C9JH25 899 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 H0YGG7 62 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 GOSR2O14653 212 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF780AO75290 641 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 APBB3O95704 486 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 PDGFAP04085 211 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 SYPP08247 313 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 UGT2B7P16662 529 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 HNRNPA2B1P22626 353 aaKnown RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 GJA4P35212 333 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 PRKXP51817 358 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 CLDN12P56749 244 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 FXYD6P3P58550 94 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 ARF3P61204 181 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 BDH1Q02338 343 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 RASGEF1BQ0VAM2 473 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 GRK1Q15835 563 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 CDKN3Q16667 212 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 CDNFQ49AH0 187 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 FAM78AQ5JUQ0 283 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 LAIR2Q6ISS4 152 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 SLC18B1Q6NT16 456 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 VASH1Q7L8A9 365 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 MAMDC2Q7Z304 686 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 KCTD20Q7Z5Y7 419 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 C12orf40Q86WS4 652 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF761Q86XN6 746 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 TMEFF1Q8IYR6 380 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 TCTE3Q8IZS6 198 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 ANKRD53Q8N9V6 530 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 POGLUT1Q8NBL1 392 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 BBS1Q8NFJ9 593 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 ADAMTS18Q8TE60 1221 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 PCNPQ8WW12 178 aaKnown RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 WDR34Q96EX3 536 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 SLC35A4Q96G79 324 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 FCRL1Q96LA6 429 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 OR14A2Q96R54 314 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 MNTQ99583 582 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF436Q9C0F3 470 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-205ENST00000438362 SERINC1Q9NRX5 453 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 HPF1Q9NWY4 346 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 SLC39A1Q9NY26 324 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 PAPPA2Q9BXP8 1791 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 A0A0A6YYC8 382 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 A0A0J9YY10 115 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 MEGF11A6BM72 1044 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms