RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 P2RX1P51575 399 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 TAS2R41P59536 307 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 RPP38P78345 283 aaKnown RBP6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 SPIBQ01892 262 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 OC90Q02509 493 aaPredicted RBP6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 FOXD4Q12950 439 aaPredicted RBP6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 DGCR6Q14129 220 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 SEC23BQ15437 767 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 TOMM34Q15785 309 aaPredicted RBP6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 COL28A1Q2UY09 1125 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 COLEC12Q5KU26 742 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 PRAMEF20Q5VT98 475 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 ZNF770Q6IQ21 691 aaPredicted RBP6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 SLC30A6Q6NXT4 461 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 PODNL1Q6PEZ8 512 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 ZNF613Q6PF04 617 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 SHQ1Q6PI26 577 aaKnown RBP6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 IGFL2Q6UWQ7 119 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 WDR88Q6ZMY6 472 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 PLEKHM3Q6ZWE6 761 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 MISPQ8IVT2 679 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 NKAIN4Q8IVV8 208 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 OFCC1Q8IZS5 231 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 CYP4Z2PQ8N1L4 340 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 CBR4Q8N4T8 237 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 TMCO5AQ8N6Q1 288 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 WDSUB1Q8N9V3 476 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 PSD4Q8NDX1 1056 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 MDS2Q8NDY4 140 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 OR2M3Q8NG83 312 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 OR5W2Q8NH69 310 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 OR5K1Q8NHB7 308 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 GPR119Q8TDV5 335 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 NR4A3Q92570 626 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 EME1Q96AY2 570 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 ZNF775Q96BV0 537 aaPredicted RBP6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 NRBF2Q96F24 287 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 SLC41A3Q96GZ6 507 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 ALPK1Q96QP1 1244 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 UTP23Q9BRU9 249 aaKnown RBP6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 OSBPL11Q9BXB4 747 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 TRIM2Q9C040 744 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 POLR2J2Q9GZM3 115 aaKnown RBP6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 POLR2J3Q9H1A7 115 aaKnown RBP6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 C7orf69Q9H7B7 122 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 SMURF2Q9HAU4 748 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 TMEM27Q9HBJ8 222 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 EMC7Q9NPA0 242 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 SDHAF3Q9NRP4 125 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 DEPPQ9NTK1 212 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 KLRF1Q9NZS2 232 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 MED11Q9P086 117 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 PPP4R1LQ9P1A2 415 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 LRFN1Q9P244 771 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 SLC7A7Q9UM01 511 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 RAXQ9Y2V3 346 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 WIF1Q9Y5W5 379 aa6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 RIF1Q5UIP0 2472 aaKnown RBP6.39□□□□□ -1.39
LSM3P3-201ENST00000436601 FAM186AA6NE01 2351 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 A0A087WUU8 490 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 A0A0G2JMM0 328 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 A0A1W2PPB8 328 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 A0A1W2PRS3 328 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 SH3PXD2BA1X283 911 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 PINLYPA6NC86 204 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 OR5H15A6NDH6 313 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 ANKUB1A6NFN9 424 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 KIR3DP1A8MWS1 328 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 K7ENP7 123 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 DLGAP1O14490 977 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 RRP8O43159 456 aaKnown RBP6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 TRIM3O75382 744 aaPredicted RBP6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 E2F6O75461 281 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 SNX4O95219 450 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 RASAL1O95294 804 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 P04436 131 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 THRBP10828 461 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 CNR1P21554 472 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 ELAVL4P26378 380 aaKnown RBP6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 GNALP38405 381 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 CASRP41180 1078 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 SLC6A8P48029 635 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 DNASE1L1P49184 302 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 CCR4P51679 360 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 SUMO3P55854 103 aaPredicted RBP6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 SMIM11AP58511 58 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 PPP2R2BQ00005 443 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 ST3GAL3Q11203 375 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 LSAMPQ13449 338 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 GK3PQ14409 553 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 TRAM2Q15035 370 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 QPRTQ15274 297 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 OR1C1Q15619 314 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 MICAQ29983 383 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 OTUD3Q5T2D3 398 aaPredicted RBP6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 WBP2NLQ6ICG8 309 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 PPP4R4Q6NUP7 873 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 FAHD1Q6P587 224 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 ULK3Q6PHR2 472 aa6.38□□□□□ -1.39
LSM3P3-201ENST00000436601 INO80CQ6PI98 192 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms