RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.09■□□□□ 0.33
CLK1-205ENST00000434813 MZT2BQ6NZ67 158 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 PXKQ7Z7A4 578 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 CADM2Q8N3J6 435 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 C17orf47Q8NEP4 570 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 OR5M3Q8NGP4 307 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 RNF31Q96EP0 1072 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 PGLYRP3Q96LB9 341 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 DGAT2Q96PD7 388 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 SNX18Q96RF0 628 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 PPIL3Q9H2H8 161 aaKnown RBP17.09■□□□□ 0.33
CLK1-205ENST00000434813 MKKSQ9NPJ1 570 aaPredicted RBP17.09■□□□□ 0.33
CLK1-205ENST00000434813 WSB2Q9NYS7 404 aaPredicted RBP17.09■□□□□ 0.33
CLK1-205ENST00000434813 RPS6KB2Q9UBS0 482 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 RGS13O14921 159 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 ZNF749O43361 778 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 IDH3BO43837 385 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 CDC123O75794 336 aaPredicted RBP17.08■□□□□ 0.33
CLK1-205ENST00000434813 NDUFB2O95178 105 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 NSA2O95478 260 aaKnown RBP17.08■□□□□ 0.33
CLK1-205ENST00000434813 PRKAR1AP10644 381 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 ELK1P19419 428 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 MLLT3P42568 568 aaPredicted RBP17.08■□□□□ 0.33
CLK1-205ENST00000434813 CAPZBP47756 277 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 MAZP56270 477 aaKnown RBP17.08■□□□□ 0.33
CLK1-205ENST00000434813 ZNF267Q14586 743 aaPredicted RBP17.08■□□□□ 0.33
CLK1-205ENST00000434813 UBXN2BQ14CS0 331 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 ZFP69Q49AA0 526 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 IDNKQ5T6J7 187 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 DMKNQ6E0U4 476 aaPredicted RBP17.08■□□□□ 0.33
CLK1-205ENST00000434813 TRILQ7L0X0 811 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 TPRA1Q86W33 373 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 LRRC28Q86X40 367 aaPredicted RBP17.08■□□□□ 0.33
CLK1-205ENST00000434813 OR6C4Q8NGE1 309 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 CAPSLQ8WWF8 208 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 SLC7A6Q92536 515 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 TP53INP1Q96A56 240 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 KLHDC7BQ96G42 594 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 TCTN2Q96GX1 697 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 ZNF578Q96N58 590 aaPredicted RBP17.08■□□□□ 0.33
CLK1-205ENST00000434813 ERMAPQ96PL5 475 aaPredicted RBP17.08■□□□□ 0.33
CLK1-205ENST00000434813 ORAI3Q9BRQ5 295 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 NOX1Q9Y5S8 564 aa17.08■□□□□ 0.33
CLK1-205ENST00000434813 FAM25AB3EWG3 89 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 FAM25CB3EWG5 89 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 FAM25GB3EWG6 89 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 J3QLW9 94 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 CLDN4O14493 209 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 GYPBP06028 91 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 FAM157BP0CG42 384 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 CT45A8P0DMV1 189 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 CT45A9P0DMV2 189 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 ZNF19P17023 458 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 SHC1P29353 583 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 THBS2P35442 1172 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 OR12D2P58182 307 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 MAT1AQ00266 395 aaKnown RBP17.08■□□□□ 0.32
CLK1-205ENST00000434813 GGTLC2Q14390 218 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 CT45A2Q5DJT8 189 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 PLET1Q6UQ28 207 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 DUSP18Q8NEJ0 188 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 ABHD4Q8TB40 342 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 SGTBQ96EQ0 304 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 ZNF285Q96NJ3 590 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 TTYH2Q9BSA4 534 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 EXTL2Q9UBQ6 330 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 KLHL21Q9UJP4 597 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 SLCO1B1Q9Y6L6 691 aa17.08■□□□□ 0.32
CLK1-205ENST00000434813 DNAH14Q0VDD8 3507 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 LYRM1O43325 122 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 ZNF217O75362 1048 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 FASLGP48023 281 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 SLC3A1Q07837 685 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 FUT7Q11130 342 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 SF3A2Q15428 464 aaKnown RBP17.07■□□□□ 0.32
CLK1-205ENST00000434813 SFXN4Q6P4A7 337 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 SSX6Q7RTT6 188 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 UBE2J2Q8N2K1 259 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 Q8N9G6 341 aaPredicted RBP17.07■□□□□ 0.32
CLK1-205ENST00000434813 POMGNT2Q8NAT1 580 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 OR52E2Q8NGJ4 325 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 C16orf52Q8NHV5 167 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 FAM174AQ8TBP5 190 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 TP63Q9H3D4 680 aaPredicted RBP17.07■□□□□ 0.32
CLK1-205ENST00000434813 MARCH7Q9H992 704 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 CYSLTR2Q9NS75 346 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 DDX28Q9NUL7 540 aaKnown RBP17.07■□□□□ 0.32
CLK1-205ENST00000434813 ST6GALNAC2Q9UJ37 374 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 ICAM5Q9UMF0 924 aa17.07■□□□□ 0.32
CLK1-205ENST00000434813 A0A087WUJ7 227 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 SERINC4A6NH21 518 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 TTC36A6NLP5 189 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 HIST1H1CP16403 213 aaKnown RBP17.06■□□□□ 0.32
CLK1-205ENST00000434813 NRG3P56975 720 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 SF3B4Q15427 424 aaKnown RBP eCLIP17.06■□□□□ 0.328e-9■■■■■ 52
CLK1-205ENST00000434813 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.06■□□□□ 0.32
CLK1-205ENST00000434813 FAM27D1Q5T7N8 215 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 CEACAM19Q7Z692 300 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 BCORP1Q8N888 145 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 TEX19Q8NA77 164 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms