RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 PITPNAQ00169 270 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 TFF2Q03403 129 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 DLX2Q07687 328 aaPredicted RBP9.59□□□□□ -0.87
CD44-210ENST00000434472 SERTAD2Q14140 314 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 ZNF267Q14586 743 aaPredicted RBP9.59□□□□□ -0.87
CD44-210ENST00000434472 INSL4Q14641 139 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 CDK10Q15131 360 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 PON3Q15166 354 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.59□□□□□ -0.87
CD44-210ENST00000434472 ACSM3Q53FZ2 586 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.59□□□□□ -0.87
CD44-210ENST00000434472 FAAH2Q6GMR7 532 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 SFXN4Q6P4A7 337 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 RPL22L1Q6P5R6 122 aaKnown RBP9.59□□□□□ -0.87
CD44-210ENST00000434472 ZC3H14Q6PJT7 736 aaKnown RBP9.59□□□□□ -0.87
CD44-210ENST00000434472 KIRREL2Q6UWL6 708 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 PARGQ86W56 976 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 SLC35F2Q8IXU6 374 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 TCTE3Q8IZS6 198 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 OR52E2Q8NGJ4 325 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 UBASH3BQ8TF42 649 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 RFT1Q96AA3 541 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 MARVELD1Q9BSK0 173 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 TRAF4Q9BUZ4 470 aaPredicted RBP9.59□□□□□ -0.87
CD44-210ENST00000434472 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.59□□□□□ -0.87
CD44-210ENST00000434472 SLA2Q9H6Q3 261 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 B3GAT2Q9NPZ5 323 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 ABRACLQ9P1F3 81 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 HCN3Q9P1Z3 774 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 TEKT2Q9UIF3 430 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 ST6GALNAC2Q9UJ37 374 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 ZMIZ1Q9ULJ6 1067 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 SLC6A5Q9Y345 797 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 ZNF337Q9Y3M9 751 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 FANCMQ8IYD8 2048 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 A0A087WUJ7 227 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 B4DGG1 531 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 E9PI62 339 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 ARPC3O15145 178 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 FOXS1O43638 330 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 TMEM127O75204 238 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 OR7A10O76100 309 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 NGFRP08138 427 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 CELA2BP08218 269 aaPredicted RBP9.58□□□□□ -0.88
CD44-210ENST00000434472 FAM157BP0CG42 384 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 IL9P15248 144 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 ALAS2P22557 587 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 PYCR1P32322 319 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 THBS2P35442 1172 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 GPR3P46089 330 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 DIO1P49895 249 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 OR12D2P58182 307 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 PRPS1P60891 318 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 PPP1CAP62136 330 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 E2F1Q01094 437 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 FUT7Q11130 342 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 FHL1Q13642 323 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 IL10RAQ13651 578 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 DEFB110Q30KQ9 67 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 CDONQ4KMG0 1287 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 CCDC58Q4VC31 144 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 ZNF542PQ5EBM4 170 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 TCTE1Q5JU00 501 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 FCRLBQ6BAA4 426 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 NPSR1Q6W5P4 371 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 LIX1LQ8IVB5 337 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 ASCC1Q8N9N2 400 aaKnown RBP9.58□□□□□ -0.88
CD44-210ENST00000434472 CYB561A3Q8NBI2 242 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 RCBTB1Q8NDN9 531 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 C7orf57Q8NEG2 295 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 OR7G1Q8NGA0 311 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 CREB3L1Q96BA8 519 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 TOE1Q96GM8 510 aaKnown RBP9.58□□□□□ -0.88
CD44-210ENST00000434472 PEX11GQ96HA9 241 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 PGLYRP3Q96LB9 341 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 CMTM3Q96MX0 182 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 ZNF285Q96NJ3 590 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 NDEL1Q9GZM8 345 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 NIPAL2Q9H841 368 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 TMEM165Q9HC07 324 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 ING3Q9NXR8 418 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 WSB2Q9NYS7 404 aaPredicted RBP9.58□□□□□ -0.88
CD44-210ENST00000434472 PLCL2Q9UPR0 1127 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 RASD1Q9Y272 281 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 OR10H1Q9Y4A9 318 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 IER3IP1Q9Y5U9 82 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 ALG5Q9Y673 324 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 ATG2BQ96BY7 2078 aa9.58□□□□□ -0.88
CD44-210ENST00000434472 A0A0G2JK05 382 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 A0A1W2PPC4 97 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 LILRA5A6NI73 299 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 NOTOA8MTQ0 251 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 CENPBD1B2RD01 187 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 FAM47E-STBD1D6RA91 191 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 HRO43593 1189 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 GPRIN2O60269 458 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 PROS1P07225 676 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 CLUP10909 449 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 PNMTP11086 282 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 HIST1H1CP16403 213 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms