RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 LALBAP00709 142 aa11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 ALDOBP05062 364 aa11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 ZNF888P0CJ79 500 aaPredicted RBP11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 CPEP16870 476 aa11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 G0S2P27469 103 aa11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 FNTBP49356 437 aa11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 RAB40BQ12829 278 aa11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 OPCMLQ14982 345 aa11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 ZIC1Q15915 447 aa11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 SHISA5Q8N114 240 aa11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 CCL4L1Q8NHW4 92 aa11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 RHOVQ96L33 236 aa11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 MARVELD1Q9BSK0 173 aa11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 RPP25Q9BUL9 199 aaKnown RBP11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 KATNB1Q9BVA0 655 aa11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 TMEM106CQ9BVX2 250 aa11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 ZNF436Q9C0F3 470 aaPredicted RBP11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 CACYBPQ9HB71 228 aaKnown RBP11.34□□□□□ -0.59
SEMA3F-206ENST00000434342 ANXA2P2A6NMY6 339 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 GATCO43716 136 aaKnown RBP11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 DNAJB6O75190 326 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 NMBP08949 121 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 LIMS3P0CW19 117 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 LIMS4P0CW20 117 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 FUT1P19526 365 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 C5AR1P21730 350 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 NUBP1P53384 320 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 STXBP1P61764 594 aaKnown RBP11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 RPS21P63220 83 aaKnown RBP11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 TSPAN31Q12999 210 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 MELKQ14680 651 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 FAM111BQ6SJ93 734 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 ENPP7Q6UWV6 458 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 CD300LDQ6UXZ3 194 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 TMEM64Q6YI46 380 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 BEND4Q6ZU67 534 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 OVCH2Q7RTZ1 564 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 OR7G2Q8NG99 324 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 PHOSPHO2Q8TCD6 241 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 NKX6-2Q9C056 277 aaPredicted RBP11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 SLCO1C1Q9NYB5 712 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 PLEKHB1Q9UF11 243 aaPredicted RBP11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 TBC1D29Q9UFV1 150 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 WDR45Q9Y484 360 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 CD8B2A6NJW9 211 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 H0Y8X5 98 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 IL1AP01583 271 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 CD8BP10966 210 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 PTBP1P26599 531 aaKnown RBP eCLIP11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 AHRP35869 848 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 MC2RQ01718 297 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 PLK5Q496M5 336 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 C3orf38Q5JPI3 329 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 MRM1Q6IN84 353 aaKnown RBP11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 OR51G2Q8NGK0 314 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 OR4Q3Q8NH05 313 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 SAMD8Q96LT4 415 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 ZNF251Q9BRH9 671 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 APOOQ9BUR5 198 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 RAB11FIP5Q9BXF6 653 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 TEX12Q9BXU0 123 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 NANSQ9NR45 359 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 ZNF624Q9P2J8 865 aaPredicted RBP11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 CES1P1Q9UKY3 287 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 CHST2Q9Y4C5 530 aa11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 MTCL1Q9Y4B5 1905 aaKnown RBP11.33□□□□□ -0.6
SEMA3F-206ENST00000434342 NPIPA5A0A0B4J1W7 369 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 NPIPA7E9PJI5 369 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 GPR31O00270 319 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 SNAPINO95295 136 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 ZIC2O95409 532 aaPredicted RBP11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 GKN3PP0CG01 181 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 NPIPA8P0DM63 369 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 IGFALSP35858 605 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 SLC1A3P43003 542 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 LGALS3BPQ08380 585 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 NUDT18Q6ZVK8 323 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 MARCH9Q86YJ5 346 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 ZNF614Q8N883 585 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 RELL2Q8NC24 303 aaPredicted RBP11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 BVESQ8NE79 360 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 DIO2Q92813 273 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 TSACCQ96A04 125 aaPredicted RBP11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 SPRTNQ9H040 489 aaPredicted RBP11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 METTL17Q9H7H0 456 aaPredicted RBP11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 OR6C2Q9NZP2 312 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 PURGQ9UJV8 347 aaKnown RBP11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 SLC7A7Q9UM01 511 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 ALPK3Q96L96 1907 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 ZC3H12DA2A288 527 aaKnown RBP11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 GSAPA4D1B5 854 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 KLHL26Q53HC5 615 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 TMEM31Q5JXX7 168 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 ELP2Q6IA86 826 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 SLC25A25Q6KCM7 469 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 RAB11FIP2Q7L804 512 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 NRROSQ86YC3 692 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 CPOQ8IVL8 374 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 SLC41A3Q96GZ6 507 aa11.32□□□□□ -0.6
SEMA3F-206ENST00000434342 DMRTA2Q96SC8 542 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms